Gene: PSO541G2997
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO541G2997
- Transcript Identifier PSO541G2997.01
- Gene Type Coding gene
- Location NC_039363.1 : 105339911-105342725 : positive
Gene Family Information
- ID HOM05D006078
- #Genes/#Species 130/97
- Phylogenetic origin
- ID ORTHO05D008109
- #Genes/#Species 123/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026537831.1
- pid XP_026393616.1
- id gene-LOC113288712
Descriptions
- product CDK5RAP1-like protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006400 | IEA | InterPro | tRNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0035596 | IEA | InterPro | methylthiotransferase activity | |
| GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding | |
| GO:0016740 | IEA | InterPro | transferase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007197 | Radical SAM |
| IPR013848 | Methylthiotransferase, N-terminal |
| IPR023404 | Radical SAM, alpha/beta horseshoe |
| IPR002792 | TRAM domain |
| IPR006463 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB |
| IPR038135 | Methylthiotransferase, N-terminal domain superfamily |
| IPR005839 | Methylthiotransferase |
| IPR006638 | Elp3/MiaB/NifB |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |