Gene: vmacro17728
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro17728
- Transcript Identifier vmacro17728-RA
- Gene Type Coding gene
- Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 17381215-17392740 : negative
Gene Family Information
- ID HOM05D006078
- #Genes/#Species 130/97
- Phylogenetic origin
- ID ORTHO05D008109
- #Genes/#Species 123/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro17728_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to At4g36390: CDK5RAP1-like protein (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006400 | IEA | InterPro | tRNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | InterPro | transferase activity | |
| GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding | |
| GO:0035596 | IEA | InterPro | methylthiotransferase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002792 | TRAM domain |
| IPR005839 | Methylthiotransferase |
| IPR023404 | Radical SAM, alpha/beta horseshoe |
| IPR013848 | Methylthiotransferase, N-terminal |
| IPR006638 | Elp3/MiaB/NifB |
| IPR038135 | Methylthiotransferase, N-terminal domain superfamily |
| IPR006463 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB |
| IPR007197 | Radical SAM |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |