Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7520 LG-2 - View
Acer truncatum Atru.chr11.1896 chr11 - View
Actinidia chinensis Actinidia31186 Lachesis_group12 - View
Actinidia chinensis Actinidia08218 Lachesis_group15 - View
Arabidopsis lyrata AL5G11930 scaffold_5 + View
Arabidopsis lyrata AL1G26300 scaffold_1 - View
Avicennia marina MSTRG.677 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.03g135410 AmaHy_arrow1_Scaffold_3 - View
Amaranthus hybridus Ah.02g131300 Single-stranded DNA-binding protein WHY3, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 11) (Protein WHIRLY 3) (AtWHY3) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G03287 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YZ1SAE PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G14410 ssDNA-binding transcriptional regulator Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length. WHIRLY 1 (WHY1)%3B FUNCTIONS IN: DNA binding%2C telomeric DNA binding%3B INVOLVED IN: negative regulation of telomere maintenance via telomerase%2C defense response%3B LOCATED IN: plastid chromosome%2C chloroplast%2C nucleoid%2C telomerase holoenzyme complex%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044)%2C Plant transcription factor (InterPro:IPR013742)%3B BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2)%3B Has 106 Blast hits to 105 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 96%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G02740 ssDNA-binding transcriptional regulator Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain%2C a putative DNA-binding domain%2C with potato p24 and is localized to the plastid and not the nucleus. WHIRLY 3 (WHY3)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: defense response%3B LOCATED IN: plastid chromosome%2C chloroplast%2C nucleoid%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044)%2C Plant transcription factor (InterPro:IPR013742)%3B BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC06g31219 ChrC06 - View
Brassica carinata BcaC06g34043 ChrC06 - View
Brassica carinata BcaB03g13099 ChrB03 + View
Brassica carinata BcaC07g38735 ChrC07 - View
Brassica napus C07p33350 C07 + View
Brassica napus C08p16630 C08 - View
Brassica napus A06p43510 A06 - View
Brassica oleracea BolC8t49290H C8 - View
Brassica oleracea BolC7t43845H C7 + View
Brassica rapa BraA06t27236Z A06 - View
Beta vulgaris EL10Ac6g13159 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0037400 conserved hypothetical protein [Ricinus communis] Chr6 + View
Camellia sinensis var. sinensis CSS0003597 conserved hypothetical protein [Ricinus communis] Contig890 - View
Capsicum annuum CAN.G279.16 PGAv.1.6.scaffold279 + View
Cannabis sativa CANSAT64G0034 NC_044379.1 + View
Cicer arietinum L. Ca_04748_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12053 Similar to WHY1: Single-stranded DNA-binding protein WHY1, chloroplastic (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g13390 ssDNA-binding transcriptional regulator chr11 - View
Citrus clementina Ciclev10032427m.g scaffold_4 + View
Cardamine hirsuta CARHR145170 ssDNA-binding transcriptional regulator Chr5 + View
Cardamine hirsuta CARHR014850 ssDNA-binding transcriptional regulator Chr1 - View
Carya illinoinensis CiPaw.05G139000 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr05 - View
Carya illinoinensis CiPaw.06G081400 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr06 + View
Corchorus olitorius COL.COLO4_23042 ssDNA-binding transcriptional regulator AWUE01018145.1 - View
Chenopodium quinoa AUR62005735 WHY3: Single-stranded DNA-binding protein WHY3, chloroplastic C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62028826 WHY1: Single-stranded DNA-binding protein WHY1, chloroplastic C_Quinoa_Scaffold_2837 - View
Capsella rubella Carub.0001s1411 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED scaffold_1 - View
Capsella rubella Carub.0005s0165 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_6G036290 Single-stranded DNA-binding protein chr6 + View
Daucus carota DCAR_007135 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv24963 GWHABJS00000018 + View
Davidia involucrata Dinv34209 GWHABJS00000008 + View
Durio zibethinus Duzib248G0520 NW_019168048.1 + View
Durio zibethinus Duzib268G0877 NW_019168270.1 - View
Eucalyptus grandis Eucgr.G02539 Chr07 - View
Erythranthe guttata Migut.L01333 scaffold_12 - View
Eutrema salsugineum Thhalv10004763m.g PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED scaffold_6 - View
Fragaria x ananassa FAN07G0400 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Fvb4-4 - View
Fragaria x ananassa FAN12G3575 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Fvb4-3 + View
Fragaria x ananassa FAN17G1220 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Fvb4-2 + View
Fragaria vesca FvH4_4g31850 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Fvb4 - View
Gossypium hirsutum Gohir.A13G072000 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED A13 + View
Glycine max Glyma.01G043000 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Gm01 + View
Glycine max Glyma.18G124800 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Gm18 - View
Glycine max Glyma.08G297200 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Gm08 + View
Glycine max Glyma.02G019900 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Gm02 - View
Helianthus annuus HanXRQChr15g0478051 Probable ssDNA-binding transcriptional regulator HanXRQChr15 - View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106610 Hma1.2p1_0265F.1 + View
Lupinus albus Lalb_Chr04g0256301 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Lalb_Chr04 - View
Lupinus albus Lalb_Chr17g0340411 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Lalb_Chr17 + View
Lotus japonicus Lj2g0012688 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED chr2 + View
Lotus japonicus Lj4g0017465 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED chr4 - View
Lactuca sativa Lsat_1_v5_gn_3_50760 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Lsat_1_v8_lg_3 + View
Malus domestica MD13G1078000 ssDNA-binding transcriptional regulator Chr13 - View
Malus domestica MD16G1077800 ssDNA-binding transcriptional regulator Chr16 - View
Manihot esculenta Manes.01G189300 Chromosome01 - View
Medicago truncatula Medtr8g468570 whirly transcription factor chr8 - View
Medicago truncatula Medtr5g038560 single-stranded DNA-binding protein WHY3 chr5 + View
Nelumbo nucifera Nn3g17141 chr3 + View
Nelumbo nucifera Nn4g23066 chr4 + View
Nicotiana tabacum Nitab4.5_0000879g0050 ssDNA-binding transcriptional regulator, Plant transcription factor Nitab4.5_0000879 - View
Petunia axillaris Peaxi162Scf00209g00226 Single-stranded DNA-binding protein WHY1, chloroplastic Peaxi162Scf00209 - View
Punica granatum PGR119G0719 NC_045132.1 - View
Prunus persica Prupe.1G269100 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Pp01 + View
Pisum sativum Psat2g124480 Whirly transcription factor chr2LG1 - View
Populus trichocarpa Potri.008G149100 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr08 + View
Populus trichocarpa Potri.010G092500 PTHR31745//PTHR31745:SF2 - FAMILY NOT NAMED // SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr10 - View
Phaseolus vulgaris Phvul.002G089800 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED Chr02 - View
Phaseolus vulgaris Phvul.003G068800 Chr03 - View
Quercus lobata QL03p065467 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0440511 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0130500 chr12 + View
Striga asiatica SGA_v2.0_scaffold302G47852 scaffold302 - View
Salvia bowleyana SalBow2G0512 GWHASIU00000007 + View
Salix brachista Sabra08G0113300 GWHAAZH00000008 + View
Simmondsia chinensis Sc14g0008330 GWHAASQ00000014 - View
Solanum lycopersicum Solyc05g007100.3 Single-stranded DNA-binding protein WHY1, chloroplastic (AHRD V3.3 *** WHY1_SOLTU) SL4.0ch05 + View
Schrenkiella parvula Sp1g12780 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED ch1-1 - View
Schrenkiella parvula Sp2g13850 PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED ch2-4 + View
Solanum pennellii Sopen05g003070 Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length. | WHIRLY 1 (WHY1) | FUNCTIONS IN: DNA binding, telomeric DNA binding | INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response | LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator , Plant transcription factor | BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400017627 DNA-binding protein p24 ST4.03ch05 - View
Selenicereus undatus Hund05904 Scaffold_19641 - View
Trochodendron aralioides TAR374G0396 group12 - View
Theobroma cacao Thecc.02G354200 SsDNA-binding transcriptional regulator Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822102 single-stranded DNA-binding protein WHY1%2C chloroplastic-like NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104805139 single-stranded DNA-binding protein WHY1%2C chloroplastic-like NW_010961290.1 + View
Trifolium pratense TPR.G33277 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G13775 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI18G1272 NC_052241.1 + View
Vaccinium macrocarpon vmacro16331 Similar to WHY1: Single-stranded DNA-binding protein WHY1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1690 CM024069.1 - View
Vigna mungo VMungo1215G2920 CM024074.1 - View
Vitis vinifera GSVIVG01020061001 chr1 + View