Gene: Sp1g12780

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp1g12780
  • Transcript Identifier Sp1g12780.1
  • Gene Type Coding gene
  • Location ch1-1 : 4584928-4586434 : negative

Gene Family Information

  • ID HOM05D002811
  • #Genes/#Species 246/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp1g12780.v2.2
  • pacid 45094693

Descriptions

  • Description PTHR31745:SF2 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus PGSC0003DMG400017627
GO:0032211
ISO
PLAZA Integrative Orthologynegative regulation of telomere maintenance via telomerase AT1G14410
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated PGSC0003DMG400017627
GO:0045910
ISO
PLAZA Integrative Orthologynegative regulation of DNA recombination Zm00001eb270470
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G14410
GO:0006952
IEA
InterProdefense response
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G14410
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT1G14410
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding Zm00001eb270470
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity PGSC0003DMG400017627
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding PGSC0003DMG400017627
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G14410
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G14410
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT1G14410
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT1G14410
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma Zm00001eb270470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013742 Whirly transcription factor
IPR009044 ssDNA-binding transcriptional regulator
Mapman id Description
13.5.7.1 Cell cycle organisation.organellar DNA replication.DNA recombination.recombination mediator (Whirly)