Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G19980 LG-5 - View
Acer truncatum Atru.chr12.441 chr12 - View
Actinidia chinensis Actinidia02943 Lachesis_group22 - View
Arabidopsis lyrata AL4G37080 scaffold_4 + View
Amaranthus hybridus Ah.16g102360 AmaHy_arrow1_Scaffold_16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WUGE08 PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.30T4YV PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT2G39670 Radical SAM superfamily protein Radical SAM superfamily protein%3B FUNCTIONS IN: iron-sulfur cluster binding%2C catalytic activity%2C RNA methyltransferase activity%3B INVOLVED IN: rRNA processing%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638)%2C Ribosomal RNA large subunit methyltransferase RlmN%3B (InterPro:IPR004383)%2C Radical SAM (InterPro:IPR007197)%3B BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1)%3B Has 7017 Blast hits to 7011 proteins in 2312 species: Archae - 11%3B Bacteria - 5106%3B Metazoa - 1%3B Fungi - 1%3B Plants - 134%3B Viruses - 5%3B Other Eukaryotes - 1759 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0559G015 AmTr_v1.0_scaffold00012 + View
Brassica carinata BcaC02g12095 ChrC02 + View
Brassica carinata BcaB02g09098 ChrB02 - View
Brassica carinata BcaB06g29113 ChrB06 - View
Brassica napus A05p06770 A05 - View
Brassica napus C04p07920 C04 - View
Brassica napus C04p67460 C04 + View
Brassica oleracea BolC4t22409H C4 - View
Brassica rapa BraA05t19644Z A05 - View
Beta vulgaris EL10Ac2g04741 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Chr2_EL10_PGA_scaffold6 - View
Corylus avellana Haze_17073 Protein of unknown function 11 + View
Coffea canephora Cc02_g07790 Ribosomal RNA large subunit methyltransferase N chr2 - View
Citrus clementina Ciclev10031999m.g scaffold_4 + View
Carpinus fangiana Cfa001469 Cfa01 - View
Cardamine hirsuta CARHR134510 Ribosomal RNA large subunit methyltransferase N Chr4 + View
Carya illinoinensis CiPaw.01G288000 PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN Chr01 + View
Carica papaya Cpa.g.sc1.412 supercontig_1 + View
Chenopodium quinoa AUR62039372 rlmN: Probable dual-specificity RNA methyltransferase RlmN C_Quinoa_Scaffold_4317 - View
Chenopodium quinoa AUR62012094 rlmN: Probable dual-specificity RNA methyltransferase RlmN C_Quinoa_Scaffold_1995 + View
Capsella rubella Carub.0004s2171 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) scaffold_4 + View
Davidia involucrata Dinv26021 GWHABJS00000009 - View
Durio zibethinus Duzib114G0935 NW_019167926.1 - View
Erigeron canadensis ECA232G4841 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J00005 Chr10 - View
Erythranthe guttata Migut.F00783 scaffold_6 - View
Eutrema salsugineum Thhalv10016689m.g scaffold_10 + View
Fragaria x ananassa FAN03G1719 PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN Fvb7-3 + View
Fragaria x ananassa FAN06G0650 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Fvb7-2 - View
Fragaria x ananassa FAN03G0055 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Fvb7-3 - View
Fragaria x ananassa FAN01G0725 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Fvb7-4 - View
Fragaria x ananassa FAN01G1957 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Fvb7-4 - View
Fragaria x ananassa FAN06G2139 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Fvb7-2 + View
Fragaria vesca FvH4_7g22600 PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Fvb7 + View
Gossypium hirsutum Gohir.D05G301400 PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN D05 + View
Glycine max Glyma.14G068600 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Gm14 - View
Glycine max Glyma.02G247700 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Gm02 + View
Helianthus annuus HanXRQChr02g0049161 Probable radical SAM superfamily protein HanXRQChr02 - View
Lupinus albus Lalb_Chr10g0104531 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) Lalb_Chr10 + View
Lupinus albus Lalb_Chr04g0251261 2.1.1.192 - 23S rRNA (adenine(2503)-C(2))-methyltransferase Lalb_Chr04 + View
Lotus japonicus LjContig00141g0020777 PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Contig00141 - View
Lonicera japonica Lj8A83T63 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_9_66060 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI05_g22025_MAGBIO AED:0.07 Chr05 + View
Malus domestica MD07G1199600 Radical SAM superfamily protein Chr07 + View
Manihot esculenta Manes.10G029700 Chromosome10 - View
Medicago truncatula Medtr5g079860 23S rRNA m2A2503 methyltransferase chr5 + View
Nelumbo nucifera Nn2g13352 chr2 + View
Oryza sativa ssp. japonica Os01g0973400 Similar to radical SAM domain-containing protein. chr01 - View
Petunia axillaris Peaxi162Scf00658g00730 Radical SAM superfamily protein Peaxi162Scf00658 + View
Punica granatum PGR044G0426 NC_045134.1 + View
Prunus persica Prupe.2G236300 PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Pp02 + View
Pisum sativum Psat2g041640 Radical SAM superfamily chr2LG1 - View
Papaver somniferum PSO151G0085 NW_020650971.1 + View
Populus trichocarpa Potri.010G203300 2.1.1.224 - 23S rRNA (adenine(2503)-C(8))-methyltransferase Chr10 - View
Populus trichocarpa Potri.008G056500 2.1.1.192 - 23S rRNA (adenine(2503)-C(2))-methyltransferase Chr08 + View
Quercus lobata QL08p059654 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0367701 RcHm_v2.0_Chr1 + View
Salix brachista Sabra10G0156800 GWHAAZH00000010 - View
Salix brachista Sabra08G0041100 GWHAAZH00000008 + View
Schrenkiella parvula Sp4g21930 K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) ch4-6 + View
Selenicereus undatus Hund13767 Scaffold_33679 + View
Theobroma cacao Thecc.10G040800 Radical SAM superfamily protein Chromosome_10 - View
Tarenaya hassleriana THA.LOC104824278 uncharacterized protein LOC104824278 NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104810032 uncharacterized protein LOC104810032 NW_010965122.1 + View
Trifolium pratense TPR.G3478 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI63G1737 NC_052240.1 + View
Vitis vinifera GSVIVG01016561001 chr13 - View