Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0050339 PREDICTED: ubiquitin receptor RAD23c isoform X2 [Vitis vinifera] Chr10 - View
CSS0037316 PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Nicotiana tomentosiformis] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia38382 Lachesis_group15 - View
Actinidia chinensis Actinidia13664 Lachesis_group10 - View
Actinidia chinensis Actinidia14882 Lachesis_group14 - View
Actinidia chinensis Actinidia16645 Lachesis_group4 + View
Avicennia marina MSTRG.830 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.13520 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.2246 ScioBoG_102834_HRSCAF_103055 + View
Amaranthus hybridus Ah.16g101860 Ubiquitin receptor RAD23c (AtRAD23c) (Putative DNA repair protein RAD23-3) (RAD23-like protein 3) (AtRAD23-3) AmaHy_arrow1_Scaffold_16 + View
Aquilegia oxysepala Aqoxy3G00319 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2R0TWK PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z4SPH8 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CQ5GAV K10839 - UV excision repair protein RAD23 (RAD23, HR23) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WI1D2C K10839 - UV excision repair protein RAD23 (RAD23, HR23) arahy.Tifrunner.gnm1.Arahy.19 - View
Beta vulgaris EL10Ac6g14429 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr6_EL10_PGA_scaffold0 + View
Beta vulgaris EL10Ac2g04585 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G625.7 PGAv.1.6.scaffold625 - View
Cannabis sativa CANSAT01G2966 NC_044373.1 + View
Cicer arietinum L. Ca_11180_v3 Ca_LG4_v3 + View
Corylus avellana Haze_14142 Similar to RAD23C: Ubiquitin receptor RAD23c (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_17469 Similar to RAD23C: Ubiquitin receptor RAD23c (Arabidopsis thaliana OX%3D3702) 7 - View
Citrus clementina Ciclev10011886m.g scaffold_6 + View
Citrus clementina Ciclev10031777m.g scaffold_4 + View
Carpinus fangiana Cfa007930 Cfa03 + View
Carpinus fangiana Cfa018605 Cfa07 + View
Carya illinoinensis CiPaw.03G060800 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr03 - View
Citrullus lanatus ClCG05G022800 Uv excision repair protein rad23, putative CG_Chr05 + View
Cucumis melo MELO3C012238.2 ubiquitin receptor RAD23c-like chr10 + View
Corchorus olitorius COL.COLO4_07912 hypothetical protein AWUE01013498.1 - View
Carica papaya Cpa.g.sc1.181 supercontig_1 + View
Chenopodium quinoa AUR62035244 RAD23C: Ubiquitin receptor RAD23c C_Quinoa_Scaffold_2868 + View
Chenopodium quinoa AUR62023321 RAD23D: Ubiquitin receptor RAD23d C_Quinoa_Scaffold_1352 + View
Chenopodium quinoa AUR62002881 RAD23C: Ubiquitin receptor RAD23c C_Quinoa_Scaffold_1000 + View
Chenopodium quinoa AUR62008982 RAD23D: Ubiquitin receptor RAD23d C_Quinoa_Scaffold_1710 - View
Cucumis sativus L. CsaV3_5G034230 ubiquitin receptor RAD23c-like chr5 - View
Daucus carota DCAR_026729 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_023665 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv21100 GWHABJS00000018 - View
Davidia involucrata Dinv34833 GWHABJS00000012 + View
Davidia involucrata Dinv04478 GWHABJS00000008 + View
Durio zibethinus Duzib248G1339 NW_019168048.1 - View
Durio zibethinus Duzib268G1583 NW_019168270.1 + View
Durio zibethinus Duzib251G0773 NW_019167971.1 + View
Erigeron canadensis ECA234G1519 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA246G2146 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B03019 Chr02 + View
Erythranthe guttata Migut.E00329 scaffold_5 - View
Fragaria x ananassa FAN12G1493 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Fvb4-3 - View
Fragaria x ananassa FAN22G2053 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Fvb4-1 + View
Fragaria x ananassa FAN09G2681 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN07G0481 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Fvb4-4 - View
Fragaria x ananassa FAN12G0856 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Fvb4-3 - View
Fragaria vesca FvH4_4g27550 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Fvb4 + View
Gossypium hirsutum Gohir.D13G067200 K10839 - UV excision repair protein RAD23 (RAD23, HR23) D13 + View
Gossypium hirsutum Gohir.A13G054400 K10839 - UV excision repair protein RAD23 (RAD23, HR23) A13 - View
Glycine max Glyma.20G114700 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Gm20 - View
Glycine max Glyma.10G275100 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Gm10 + View
Glycine max Glyma.01G081500 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Gm01 + View
Glycine max Glyma.18G297400 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Gm18 + View
Gossypium raimondii Gorai.013G076500 Chr13 + View
Helianthus annuus HanXRQChr17g0552171 Putative UV excision repair protein Rad23; UBA-like HanXRQChr17 + View
Lupinus albus Lalb_Chr10g0099971 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lupinus albus Lalb_Chr21g0308981 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0146051 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0166151 PTHR10621//PTHR10621:SF9 - UV EXCISION REPAIR PROTEIN RAD23 // F12F1.16 PROTEIN-RELATED Lalb_Chr06 + View
Lupinus albus Lalb_Chr04g0257401 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Lalb_Chr04 - View
Lotus japonicus Lj2g0009720 K10839 - UV excision repair protein RAD23 (RAD23, HR23) chr2 - View
Lotus japonicus Lj1g0010181 K10839 - UV excision repair protein RAD23 (RAD23, HR23) chr1 - View
Lotus japonicus Lj5g0008360 K10839 - UV excision repair protein RAD23 (RAD23, HR23) chr5 - View
Lonicera japonica Lj6A760T49 GWHAAZE00000006 + View
Lonicera japonica Lj3A1017G47 GWHAAZE00000003 + View
Lonicera japonica Lj2C443G8 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_39020 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_4_18380 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_3_59620 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 + View
Malus domestica MD09G1087400 Rad23 UV excision repair protein family Chr09 - View
Malus domestica MD16G1043900 Rad23 UV excision repair protein family Chr16 + View
Malus domestica MD13G1043000 Rad23 UV excision repair protein family Chr13 + View
Manihot esculenta Manes.02G067800 Chromosome02 - View
Manihot esculenta Manes.14G101300 Chromosome14 - View
Manihot esculenta Manes.06G069400 Chromosome06 + View
Medicago truncatula Medtr1g111090 RAD23 UV excision repair family protein chr1 + View
Nelumbo nucifera Nn4g23813 chr4 - View
Nelumbo nucifera Nn3g17814 chr3 - View
Punica granatum PGR119G0514 NC_045132.1 + View
Punica granatum PGR102G1487 NC_045129.1 + View
Prunus persica Prupe.1G309400 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Pp01 - View
Prunus persica Prupe.3G238000 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Pp03 + View
Pisum sativum Psat6g228880 DNA repair protein Rad23 signature chr6LG2 + View
Papaver somniferum PSO782G5484 NC_039365.1 + View
Papaver somniferum PSO478G1116 NC_039361.1 + View
Papaver somniferum PSO017G0864 NC_039362.1 + View
Populus trichocarpa Potri.004G100700 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr04 + View
Populus trichocarpa Potri.017G114000 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr17 - View
Populus trichocarpa Potri.008G119700 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr08 - View
Populus trichocarpa Potri.010G126200 K10839 - UV excision repair protein RAD23 (RAD23, HR23) Chr10 - View
Phaseolus vulgaris Phvul.007G026400 PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Chr07 - View
Rosa chinensis RcHm_v2.0_Chr4g0435391 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0083000 chr12 - View
Rhododendron simsii Rhsim09G0109100 chr09 + View
Striga asiatica SGA_v2.0_scaffold14G06852 scaffold14 - View
Striga asiatica SGA_v2.0_scaffold170G38752 scaffold170 - View
Salvia bowleyana SalBow8G3482 GWHASIU00000004 + View
Salix brachista Sabra10G0095900 GWHAAZH00000010 - View
Salix brachista Sabra04G0079300 GWHAAZH00000004 - View
Sechium edule Sed0016702 LG07 - View
Sechium edule Sed0024821 LG06 - View
Solanum lycopersicum Solyc04g007120.4 Ubiquitin receptor RAD23c (AHRD V3.3 *** A0A2G2WS01_CAPBA) SL4.0ch04 - View
Solanum pennellii Sopen04g002210 Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. | RADIATION SENSITIVE23C (RAD23C) | FUNCTIONS IN: ubiquitin binding, proteasome binding | INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , UV excision repair protein Rad23 , Ubiquitin , Ubiquitin supergroup , XPC-binding domain , UBA-like | BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family ., Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) Spenn-ch04 - View
Solanum pennellii Sopen02g030530 Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. | RADIATION SENSITIVE23C (RAD23C) | FUNCTIONS IN: ubiquitin binding, proteasome binding | INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , UV excision repair protein Rad23 , Ubiquitin , Ubiquitin supergroup , XPC-binding domain , UBA-like | BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family ., Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400012654 RAD23 protein ST4.03ch02 - View
Selenicereus undatus Hund25077 Scaffold_3410 + View
Selenicereus undatus Hund16138 Scaffold_33677 - View
Trochodendron aralioides TAR629G2621 group0 - View
Trochodendron aralioides TAR371G1262 group13 + View
Trochodendron aralioides TAR622G0705 group8 + View
Theobroma cacao Thecc.02G356500 Rad23 UV excision repair protein family Chromosome_2 + View
Theobroma cacao Thecc.04G135400 Chromosome_4 + View
Utricularia gibba unitig_8.g3444 unitig_8 + View
Vaccinium macrocarpon vmacro05561 Similar to RAD23C: Ubiquitin receptor RAD23c (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro10552 Similar to RAD23C: Ubiquitin receptor RAD23c (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro01376 Similar to RAD23D: Ubiquitin receptor RAD23d (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G2089 CM024071.1 + View
Vitis vinifera GSVIVG01031048001 chr14 + View
Vitis vinifera GSVIVG01011907001 chr1 - View