Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005950 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Nicotiana tomentosiformis] Contig581 - View
CSS0025474 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Nicotiana tomentosiformis] Chr15 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G2270 LG-11 - View
Aethionema arabicum Aa31LG4G4520 LG-4 + View
Acer truncatum Atru.chr9.576 chr9 + View
Actinidia chinensis Actinidia18989 Lachesis_group9 - View
Actinidia chinensis Actinidia16127 Lachesis_group13 - View
Arabidopsis lyrata AL2G34110 scaffold_2 + View
Arabidopsis lyrata AL1G31070 scaffold_1 + View
Arabidopsis lyrata AL8G37690 scaffold_8 + View
Avicennia marina MSTRG.22961 ScioBoG_3703_HRSCAF_3719 + View
Avicennia marina MSTRG.3004 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.4475 ScioBoG_102837_HRSCAF_103074 - View
Amaranthus hybridus Ah.11g047760 AmaHy_arrow1_Scaffold_11 + View
Amaranthus hybridus Ah.02g114050 AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.10g032270 Glycine-rich RNA-binding protein 3, mitochondrial (AtGR-RBP3) (AtRBG3) (Mitochondrial RNA-binding protein 2a) (At-mRBP2a) (Organelle RRM domain-containing protein 3) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy3G03691 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JF639K K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZV83LZ K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3U78JA K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NU4VZ9 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L835I9 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT5G61030 glycine-rich RNA-binding protein 3 encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. glycine-rich RNA-binding protein 3 (GR-RBP3)%3B FUNCTIONS IN: RNA binding%2C copper ion binding%2C ATP binding%3B INVOLVED IN: response to cold%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G74230 glycine-rich RNA-binding protein 5 encodes a glycine-rich RNA binding protein. glycine-rich RNA-binding protein 5 (GR-RBP5)%3B FUNCTIONS IN: RNA binding%2C copper ion binding%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1)%3B Has 144 Blast hits to 144 proteins in 27 species: Archae - 0%3B Bacteria - 5%3B Metazoa - 0%3B Fungi - 0%3B Plants - 136%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0177G053 AmTr_v1.0_scaffold00154 - View
Brassica carinata BcaC06g33182 ChrC06 - View
Brassica carinata BcaB07g31883 ChrB07 + View
Brassica napus C08p16130 C08 + View
Brassica napus C06p48420 C06 + View
Brassica napus A07p40070 A07 + View
Brassica napus A06p14750 A06 + View
Brassica oleracea BolC6t39871H C6 + View
Brassica rapa BraA07t31551Z A07 + View
Brassica rapa BraA06t24598Z A06 + View
Beta vulgaris EL10Ac5g11132 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Chr5_EL10_PGA_scaffold2 - View
Cicer arietinum L. Ca_21774_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_14346_v3 Ca_LG5_v3 - View
Corylus avellana Haze_07731 Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc07_g04200 glycine-rich RNA-binding protein 4 chr7 - View
Citrus clementina Ciclev10019850m.g scaffold_3 - View
Ceratophyllum demersum CDE04G2492 2 - View
Carpinus fangiana Cfa019340 Cfa08 + View
Cardamine hirsuta CARHR067490 RNA binding protein-like protein Chr2 + View
Cardamine hirsuta CARHR274740 RNA binding protein-like protein Chr8 + View
Carya illinoinensis CiPaw.11G053800 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Chr11 + View
Citrullus lanatus ClCG06G015620 glycine-rich RNA-binding protein 3 LENGTH=309 CG_Chr06 + View
Citrullus lanatus ClCG04G011800 Glycine-rich RNA-binding protein, putative CG_Chr04 + View
Cucumis melo MELO3C017226.2 glycine-rich RNA-binding protein 2, mitochondrial-like chr02 + View
Cucumis melo MELO3C002030.2 Glycine-rich RNA-binding protein chr12 + View
Carica papaya Cpa.g.sc94.58 supercontig_94 - View
Chenopodium quinoa AUR62008532 RBG3: Glycine-rich RNA-binding protein 3, mitochondrial C_Quinoa_Scaffold_3422 - View
Chenopodium quinoa AUR62021558 RBG3: Glycine-rich RNA-binding protein 3, mitochondrial C_Quinoa_Scaffold_1675 + View
Chenopodium quinoa AUR62018184 RBG3: Glycine-rich RNA-binding protein 3, mitochondrial C_Quinoa_Scaffold_2048 - View
Capsella rubella Carub.0008s2172 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) scaffold_8 + View
Capsella rubella Carub.0002s2102 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) scaffold_2 + View
Cucumis sativus L. CsaV3_1G002940 RNA-binding protein chr1 - View
Cucumis sativus L. CsaV3_1G005980 Glycine-rich RNA-binding protein chr1 - View
Daucus carota DCAR_023171 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_025429 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv34942 GWHABJS00000012 + View
Davidia involucrata Dinv17415 GWHABJS00000006 + View
Davidia involucrata Dinv22779 GWHABJS00000019 + View
Durio zibethinus Duzib068G0605 NW_019167838.1 - View
Durio zibethinus Duzib205G0103 NW_019168381.1 - View
Durio zibethinus Duzib084G1323 NW_019167827.1 - View
Erigeron canadensis ECA246G1030 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G4464 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA247G2959 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.I02029 Chr09 - View
Eucalyptus grandis Eucgr.B00593 Chr02 - View
Erythranthe guttata Migut.D01646 scaffold_4 + View
Erythranthe guttata Migut.H00627 scaffold_8 + View
Fragaria x ananassa FAN18G0068 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Fvb5-1 + View
Fragaria x ananassa FAN08G1191 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb5-3 - View
Fragaria x ananassa FAN13G3109 KOG0110//KOG0123//KOG0131//KOG0145 - RNA-binding protein (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) Fvb5-2 + View
Fragaria vesca FvH4_5g13810 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Fvb5 + View
Gossypium hirsutum Gohir.A03G070100 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) A03 - View
Gossypium hirsutum Gohir.D11G036600 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) D11 - View
Gossypium hirsutum Gohir.A11G033300 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) A11 - View
Gossypium hirsutum Gohir.D03G096650 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) D03 - View
Glycine max Glyma.08G245200 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Gm08 - View
Glycine max Glyma.06G203800 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Gm06 - View
Glycine max Glyma.18G266500 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Gm18 - View
Glycine max Glyma.17G078400 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Gm17 - View
Glycine max Glyma.05G020900 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Gm05 + View
Gossypium raimondii Gorai.007G039400 Chr07 - View
Gossypium raimondii Gorai.003G101300 Chr03 - View
Helianthus annuus HanXRQChr09g0270241 Putative nucleotide-binding alpha-beta plait domain HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0060F.1_g033080 Hma1.2p1_0060F.1 + View
Lupinus albus Lalb_Chr13g0302851 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Lalb_Chr13 + View
Lotus japonicus Lj1g0018457 KOG0149//KOG4205 - Predicted RNA-binding protein SEB4 (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 chr1 + View
Lotus japonicus Lj4g0010980 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) chr4 + View
Lotus japonicus Lj1g0019157 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) chr1 + View
Lonicera japonica Lj5A133T93 GWHAAZE00000005 + View
Lonicera japonica Lju41C3T3 GWHAAZE00000094 + View
Lonicera japonica Lj9A440T64 GWHAAZE00000009 - View
Lonicera japonica Lj4P118T46 GWHAAZE00000004 - View
Lonicera japonica Lj5C102T10 GWHAAZE00000005 + View
Lonicera japonica Lj9A471G29 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_1_13420 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_4_111061 Lsat_1_v8_lg_4 - View
Malus domestica MD14G1212100 glycine-rich RNA-binding protein 3 Chr14 - View
Malus domestica MD06G1225200 glycine-rich RNA-binding protein 3 Chr06 - View
Manihot esculenta Manes.06G084600 Chromosome06 + View
Manihot esculenta Manes.14G085900 Chromosome14 - View
Medicago truncatula Medtr4g109540 RNA-binding (RRM/RBD/RNP motif) family protein chr4 - View
Medicago truncatula Medtr7g013730 RNA-binding (RRM/RBD/RNP motif) family protein chr7 - View
Nelumbo nucifera Nn4g23429 chr4 - View
Nelumbo nucifera Nn3g17452 chr3 - View
Nicotiana tabacum Nitab4.5_0000212g0240 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0000212 - View
Olea europaea Oeu044871.1 chr23 - View
Oryza sativa ssp. japonica Os07g0602600 Similar to RNA binding protein. chr07 - View
Petunia axillaris Peaxi162Scf00166g00525 glycine-rich RNA-binding protein 3 Peaxi162Scf00166 + View
Punica granatum PGR044G2274 NC_045134.1 + View
Punica granatum PGR004G2423 NC_045131.1 + View
Prunus persica Prupe.5G205300 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Pp05 - View
Pisum sativum Psat4g047000 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr4LG4 - View
Papaver somniferum PSO017G6104 NC_039362.1 - View
Papaver somniferum PSO478G3354 NC_039361.1 + View
Populus trichocarpa Potri.015G057400 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Chr15 + View
Phaseolus vulgaris Phvul.003G184700 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Chr03 + View
Phaseolus vulgaris Phvul.008G033500 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Chr08 + View
Quercus lobata QL10p019544 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0183111 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0145900 chr08 + View
Rhododendron simsii Rhsim10G0048900 chr10 - View
Rhododendron simsii Rhsim12G0148300 chr12 - View
Striga asiatica SGA_v2.0_scaffold28G11751 scaffold28 + View
Striga asiatica SGA_v2.0_scaffold4G02396 scaffold4 + View
Striga asiatica SGA_v2.0_scaffold25G10958 scaffold25 + View
Striga asiatica SGA_v2.0_scaffold52G19162 scaffold52 + View
Salix brachista Sabra12G0044600 GWHAAZH00000012 - View
Salix brachista Sabra15G0082700 GWHAAZH00000015 + View
Simmondsia chinensis Sc10g0009700 GWHAASQ00000010 + View
Sechium edule Sed0017092 LG08 - View
Sechium edule Sed0000437 LG12 - View
Sechium edule Sed0009863 LG01 + View
Sechium edule Sed0010111 LG08 - View
Solanum lycopersicum Solyc02g088790.3 RNA-binding protein (AHRD V3.3 *-* Q941H8_SOLTU) SL4.0ch02 - View
Solanum lycopersicum Solyc02g066930.3 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) SL4.0ch02 + View
Schrenkiella parvula Sp2g24330 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) ch2-4 + View
Schrenkiella parvula Sp5g29410 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) ch5-7 + View
Solanum pennellii Sopen02g016120 encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. | glycine-rich RNA-binding protein 3 (GR-RBP3) | FUNCTIONS IN: RNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 Spenn-ch02 + View
Solanum pennellii Sopen02g033510 encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. | glycine-rich RNA-binding protein 3 (GR-RBP3) | FUNCTIONS IN: RNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400001453 RNA-binding protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400025154 RNA-binding glycine-rich protein ST4.03ch02 + View
Selenicereus undatus Hund02584 Scaffold_33678 + View
Selenicereus undatus Hund09915 Scaffold_10417 - View
Trochodendron aralioides TAR374G1610 group12 - View
Trochodendron aralioides TAR622G1403 group8 + View
Theobroma cacao Thecc.03G102000 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104801196 glycine-rich RNA-binding protein 3%2C mitochondrial-like isoform X1 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104818345 glycine-rich RNA-binding protein 3%2C mitochondrial-like NW_010966092.1 - View
Tarenaya hassleriana THA.LOC104819402 glycine-rich RNA-binding protein 3%2C mitochondrial-like isoform X1 NW_010966177.1 + View
Trifolium pratense TPR.G12286 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G2000 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI60G1688 NC_052246.1 + View
Tripterygium wilfordii TWI81G0396 NC_052251.1 - View
Tripterygium wilfordii TWI15G0631 NC_052247.1 + View
Vaccinium macrocarpon vmacro17611 Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16494 Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05633 Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1468 CM024074.1 - View
Vigna mungo VMungo1383G2084 CM024070.1 + View
Vitis vinifera GSVIVG01007865001 chr17 - View
Zea mays Zm00001eb326870 Zm00001e035491 Glycine-rich RNA-binding protein 3 mitochondrial 7 - View