Gene: Sp5g29410

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp5g29410
  • Transcript Identifier Sp5g29410.1
  • Gene Type Coding gene
  • Location ch5-7 : 305024-306502 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp5g29410.v2.2
  • pacid 45098079

Descriptions

  • Description K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT1G74230
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT1G74230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT1G74230
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G74230
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G74230
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G74230
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT1G74230
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G74230
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G74230
GO:0003697
ISO
PLAZA Integrative Orthologysingle-stranded DNA binding AT1G74230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G74230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.11.3.3.2 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM)