Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018167 hypothetical protein MIMGU_mgv1a006387mg [Erythranthe guttata] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6910 LG-5 + View
Acer truncatum Atru.chr8.2124 chr8 - View
Acer truncatum Atru.chr3.4039 chr3 + View
Arabidopsis lyrata AL4G24260 scaffold_4 - View
Aquilegia oxysepala Aqoxy1G00760 CHR01 + View
Arabidopsis thaliana AT2G29550 tubulin beta-7 chain Encodes a beta-tubulin that is expressed in leaves%2C roots and flowers. tubulin beta-7 chain (TUB7)%3B FUNCTIONS IN: structural constituent of cytoskeleton%3B INVOLVED IN: response to cadmium ion%2C microtubule-based process%2C response to salt stress%3B LOCATED IN: tubulin complex%2C cell wall%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453)%2C Tubulin (InterPro:IPR000217)%2C Tubulin/FtsZ%2C GTPase domain (InterPro:IPR003008)%2C Tubulin/FtsZ%2C N-terminal (InterPro:IPR019746)%2C Tubulin/FtsZ%2C C-terminal (InterPro:IPR008280)%2C Beta tubulin%2C autoregulation binding site (InterPro:IPR013838)%2C Tubulin%2C conserved site (InterPro:IPR017975)%2C Tubulin/FtsZ%2C 2-layer sandwich domain (InterPro:IPR018316)%3B BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1)%3B Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 35%3B Bacteria - 44%3B Metazoa - 4475%3B Fungi - 14216%3B Plants - 1547%3B Viruses - 0%3B Other Eukaryotes - 3354 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC01g01868 ChrC01 + View
Brassica carinata BcaC09g49790 ChrC09 - View
Brassica carinata BcaB02g10261 ChrB02 - View
Brassica carinata BcaC02g08077 ChrC02 + View
Brassica napus A04p22540 A04 - View
Brassica napus A05p15850 A05 + View
Brassica napus C04p21290 C04 + View
Brassica napus A06p20640 A06 + View
Brassica napus C04p58690 C04 - View
Brassica napus A01p25950 A01 + View
Brassica napus C01p32890 C01 + View
Brassica oleracea BolC4t23658H C4 + View
Brassica oleracea BolC4t27388H C4 - View
Brassica oleracea BolC1t03231H C1 + View
Brassica oleracea BolC3t19392H C3 - View
Brassica rapa BraA04t17799Z A04 - View
Brassica rapa BraA05t20498Z A05 + View
Beta vulgaris EL10Ac7g16098 2.4.2.1 - Purine-nucleoside phosphorylase / PNPase Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G394.96 PGAv.1.6.scaffold394 - View
Corylus avellana Haze_24231 Similar to TUBB1: Tubulin beta-1 chain (Lupinus albus OX%3D3870) 6 - View
Corylus avellana Haze_20927 Similar to TUBB1: Tubulin beta-1 chain (Zea mays OX%3D4577) 10 - View
Coffea canephora Cc01_g13670 Tubulin beta-1 chain chr1 - View
Citrus clementina Ciclev10011723m.g scaffold_6 - View
Citrus clementina Ciclev10028436m.g scaffold_8 - View
Carpinus fangiana Cfa017274 Cfa07 + View
Cardamine hirsuta CARHR122890 Tubulin beta-7 chain Chr4 - View
Carya illinoinensis CiPaw.10G153400 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr10 - View
Citrullus lanatus ClCG10G021680 tubulin beta chain 3 LENGTH=450 CG_Chr10 - View
Citrullus lanatus ClCG04G007330 Tubulin beta chain, putative CG_Chr04 + View
Cucumis melo MELO3C009203.2 tubulin beta chain-like chr04 - View
Chenopodium quinoa AUR62020068 TUBB3: Tubulin beta-3 chain C_Quinoa_Scaffold_2465 - View
Chenopodium quinoa AUR62001712 TUBB3: Tubulin beta-3 chain C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0005s1309 PTHR11588:SF109 - TUBULIN BETA-2 CHAIN-RELATED scaffold_5 - View
Capsella rubella Carub.0004s1060 K07375 - tubulin beta (TUBB) scaffold_4 - View
Cucumis sativus L. CsaV3_3G034310 Tubulin beta chain chr3 + View
Durio zibethinus Duzib150G0587 NW_019167882.1 - View
Durio zibethinus Duzib128G2035 NW_019168481.1 - View
Durio zibethinus Duzib170G0037 NW_019167871.1 + View
Erigeron canadensis ECA247G2300 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G2668 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.B02285 Chr02 + View
Eutrema salsugineum Thhalv10010368m.g PTHR11588:SF109 - TUBULIN BETA-2 CHAIN-RELATED scaffold_16 + View
Eutrema salsugineum Thhalv10016651m.g PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED scaffold_10 - View
Fragaria x ananassa FAN16G1641 PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED Fvb3-3 - View
Fragaria x ananassa FAN11G2720 PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED Fvb3-4 + View
Fragaria x ananassa FAN25G2215 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED Fvb3-1 + View
Gossypium hirsutum Gohir.D13G230700 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED D13 + View
Gossypium hirsutum Gohir.D03G119800 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.D09G158200 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED D09 - View
Gossypium hirsutum Gohir.A05G091200 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.A13G225600 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED A13 + View
Gossypium hirsutum Gohir.A03G047400 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.A09G162600 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED A09 - View
Gossypium hirsutum Gohir.D05G092100 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED D05 + View
Glycine max Glyma.01G109300 PTHR11588//PTHR11588:SF122 - TUBULIN // SUBFAMILY NOT NAMED Gm01 - View
Gossypium raimondii Gorai.013G261300 Chr13 + View
Gossypium raimondii Gorai.009G094600 Chr09 + View
Gossypium raimondii Gorai.006G179900 Chr06 - View
Gossypium raimondii Gorai.003G126300 Chr03 + View
Helianthus annuus HanXRQChr05g0135591 Putative tubulin; Beta tubulin, autoregulation binding site; Tubulin, C-terminal HanXRQChr05 + View
Lonicera japonica Lj3A958T69 GWHAAZE00000003 + View
Lonicera japonica Lj2C1073T12 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_25361 PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_8_72280 PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED Lsat_1_v8_lg_8 + View
Magnolia biondii MBI14_g28602_MAGBIO AED:0.07 Chr14 - View
Malus domestica MD03G1080000 tubulin beta 8 Chr03 + View
Malus domestica MD11G1084600 tubulin beta 8 Chr11 + View
Manihot esculenta Manes.09G100400 Chromosome09 - View
Manihot esculenta Manes.01G166100 Chromosome01 + View
Manihot esculenta Manes.02G123600 Chromosome02 + View
Manihot esculenta Manes.08G083811 Chromosome08 - View
Nicotiana tabacum Nitab4.5_0000119g0300 Tubulin/FtsZ, GTPase domain, Beta tubulin, autoregulation binding site, Beta tubulin, Tubulin, Tubulin, C-terminal, Tubulin/FtsZ, C-terminal, Tubulin, conserved site Nitab4.5_0000119 + View
Olea europaea Oeu002455.1 chr12 + View
Petunia axillaris Peaxi162Scf01058g00167 tubulin beta chain 2 Peaxi162Scf01058 + View
Petunia axillaris Peaxi162Scf00014g00924 tubulin beta chain 2 Peaxi162Scf00014 + View
Punica granatum PGR102G1710 NC_045129.1 - View
Prunus persica Prupe.6G064900 PTHR11588:SF97 - TUBULIN BETA-4 CHAIN-RELATED Pp06 + View
Papaver somniferum PSO339G3103 NC_039366.1 + View
Populus trichocarpa Potri.009G040200 PTHR11588//PTHR11588:SF122//PTHR11588:SF97 - TUBULIN // SUBFAMILY NOT NAMED // TUBULIN BETA-4 CHAIN-RELATED Chr09 - View
Populus trichocarpa Potri.006G095000 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED Chr06 - View
Populus trichocarpa Potri.001G246900 PTHR11588//PTHR11588:SF97 - TUBULIN // TUBULIN BETA-4 CHAIN-RELATED Chr01 - View
Quercus lobata QL01p028944 1 - View
Salvia bowleyana SalBow2G0252 GWHASIU00000007 - View
Salix brachista Sabra06G0072800 GWHAAZH00000006 - View
Salix brachista Sabra09G0028300 GWHAAZH00000009 - View
Salix brachista Sabra16G0150000 GWHAAZH00000016 - View
Simmondsia chinensis Sc12g0001070 GWHAASQ00000012 + View
Sechium edule Sed0007916 LG14 + View
Sechium edule Sed0006239 LG04 + View
Sechium edule Sed0022027 LG02 - View
Solanum lycopersicum Solyc06g076640.3 Tubulin beta chain (AHRD V3.3 *** A0A1U8H9E6_CAPAN) SL4.0ch06 - View
Solanum lycopersicum Solyc06g005910.4 Tubulin beta chain (AHRD V3.3 *** A0A1U8GXJ7_CAPAN) SL4.0ch06 + View
Solanum lycopersicum Solyc10g085020.3 Tubulin beta chain (AHRD V3.3 *** A0A1U8EHY4_CAPAN) SL4.0ch10 - View
Schrenkiella parvula Sp4g12280 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED ch4-6 - View
Schrenkiella parvula Sp5g14830 PTHR11588:SF109 - TUBULIN BETA-2 CHAIN-RELATED ch5-1 + View
Solanum pennellii Sopen06g001890 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. | tubulin beta 8 (TUB8) | CONTAINS InterPro DOMAIN/s: Beta tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Beta tubulin, autoregulation binding site , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 ., Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice), Tubulin/FtsZ, GTPase domain Spenn-ch06 + View
Solanum pennellii Sopen06g033030 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. | tubulin beta 8 (TUB8) | CONTAINS InterPro DOMAIN/s: Beta tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Beta tubulin, autoregulation binding site , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 ., Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice), Tubulin/FtsZ, GTPase domain Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400019131 Beta tubulin ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400030431 Beta-tubulin 2 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400020850 Beta-tubulin 16 ST4.03ch06 - View
Selenicereus undatus Hund18874 Scaffold_33675 + View
Trochodendron aralioides TAR623G1262 group7 - View
Theobroma cacao Thecc.09G309100 Tubulin beta 8 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104826302 tubulin beta-2 chain-like NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104799411 tubulin beta-2 chain-like NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104814898 tubulin beta-2 chain-like NW_010965541.1 - View
Tarenaya hassleriana THA.LOC104810737 tubulin beta-2 chain NW_010965304.1 + View
Tarenaya hassleriana THA.LOC104800712 tubulin beta-2 chain-like NW_010969548.1 - View
Tripterygium wilfordii TWI74G0574 NC_052234.1 + View
Vaccinium macrocarpon vmacro03008 Similar to TUBB3: Tubulin beta-3 chain (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20224 Similar to TUBB1: Tubulin beta-1 chain (Zea mays OX%3D4577) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01024825001 chr6 - View