Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006185 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera] Chr3 + View
CSS0038516 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G260 LG-6 + View
Aethionema arabicum Aa31LG2G13020 LG-2 + View
Acer truncatum Atru.chr9.1239 chr9 - View
Acer truncatum Atru.chr5.120 chr5 - View
Actinidia chinensis Actinidia02183 Lachesis_group23 + View
Actinidia chinensis Actinidia12142 Lachesis_group0 + View
Actinidia chinensis Actinidia10852 Lachesis_group14 - View
Actinidia chinensis Actinidia31503 Lachesis_group20 + View
Actinidia chinensis Actinidia25896 Lachesis_group22 - View
Arabidopsis lyrata AL7G37100 scaffold_7 - View
Arabidopsis lyrata AL8G10820 scaffold_8 + View
Arabidopsis lyrata AL7G37810 scaffold_7 - View
Avicennia marina MSTRG.12141 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.20686 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.12g054140 RGG repeats nuclear RNA binding protein B AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy3G02708 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6LE7D6 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT4G16830 Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family%3B CONTAINS InterPro DOMAIN/s: Stm1%2C N-terminal (InterPro:IPR019084)%2C Hyaluronan/mRNA-binding protein (InterPro:IPR006861)%3B BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1)%3B Has 23191 Blast hits to 11934 proteins in 1060 species: Archae - 16%3B Bacteria - 7670%3B Metazoa - 7282%3B Fungi - 1721%3B Plants - 3144%3B Viruses - 315%3B Other Eukaryotes - 3043 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G17520 Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%2C peroxisome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Stm1%2C N-terminal (InterPro:IPR019084)%2C Hyaluronan/mRNA-binding protein (InterPro:IPR006861)%3B BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1)%3B Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15%3B Bacteria - 3155%3B Metazoa - 5443%3B Fungi - 1433%3B Plants - 1957%3B Viruses - 142%3B Other Eukaryotes - 2432 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G47210 Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Stm1%2C N-terminal (InterPro:IPR019084)%2C Hyaluronan/mRNA-binding protein (InterPro:IPR006861)%3B BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0057G051 AmTr_v1.0_scaffold00111 + View
Brassica carinata BcaC04g21639 ChrC04 + View
Brassica carinata BcaC09g50427 ChrC09 + View
Brassica carinata BcaC06g34275 ChrC06 + View
Brassica carinata BcaNung03458 Contig1189 - View
Brassica carinata BcaC06g33561 ChrC06 - View
Brassica carinata BcaC07g38085 ChrC07 + View
Brassica carinata BcaB07g30786 ChrB07 + View
Brassica carinata BcaC09g51634 ChrC09 - View
Brassica carinata BcaNung00142 Contig74 - View
Brassica carinata BcaC06g31406 ChrC06 + View
Brassica napus C01p25530 C01 - View
Brassica napus C07p30910 C07 - View
Brassica napus A03p50500 A03 + View
Brassica napus A09p22930 A09 - View
Brassica napus A02p30950 A02 - View
Brassica napus C09p29510 C09 - View
Brassica napus C02p48560 C02 - View
Brassica napus A08p13200 A08 + View
Brassica napus A08p12770 A08 + View
Brassica napus A06p45200 A06 + View
Brassica napus C07p48820 C07 + View
Brassica napus A01p20360 A01 - View
Brassica oleracea BolC8t48499H C8 + View
Brassica oleracea BolC1t02503H C1 - View
Brassica oleracea BolC8t48417H C8 + View
Brassica oleracea BolC2t10889H C2 - View
Brassica oleracea BolC7t45390H C7 + View
Brassica oleracea BolC7t43634H C7 - View
Brassica oleracea BolC9t55814H C9 - View
Brassica rapa BraA01t01966Z A01 - View
Brassica rapa BraA03t14139Z A03 + View
Brassica rapa BraA09t37894Z A09 - View
Brassica rapa BraA02t08106Z A02 - View
Brassica rapa BraA06t27389Z A06 + View
Beta vulgaris EL10Ac5g12298 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr5_EL10_PGA_scaffold2 - View
Beta vulgaris EL10Ac1g00747 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G761.26 PGAv.1.6.scaffold761 - View
Capsicum annuum CAN.G845.17 PGAv.1.6.scaffold845 + View
Cannabis sativa CANSAT25G2969 NC_044370.1 - View
Cannabis sativa CANSAT21G2599 NC_044374.1 + View
Corylus avellana Haze_02853 Similar to RGGB: RGG repeats nuclear RNA binding protein B (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc08_g11620 Putative Hyaluronan / mRNA binding family chr8 - View
Citrus clementina Ciclev10020747m.g scaffold_3 - View
Ceratophyllum demersum CDE02G0684 1 + View
Ceratophyllum demersum CDE11G0377 9 - View
Carpinus fangiana Cfa011064 Cfa04 - View
Cardamine hirsuta CARHR174150 Nuclear RNA binding protein A-like protein Chr6 + View
Cardamine hirsuta CARHR224220 Nuclear RNA binding protein, putative Chr7 + View
Cardamine hirsuta CARHR223450 Nuclear RNA binding protein, putative Chr7 + View
Carya illinoinensis CiPaw.14G020000 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr14 - View
Carya illinoinensis CiPaw.12G048100 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr12 - View
Citrullus lanatus ClCG09G012870 Nuclear RNA-binding family protein CG_Chr09 - View
Chenopodium quinoa AUR62023395 Protein of unknown function C_Quinoa_Scaffold_1352 - View
Chenopodium quinoa AUR62007145 Protein of unknown function C_Quinoa_Scaffold_1971 + View
Chenopodium quinoa AUR62018866 Protein of unknown function C_Quinoa_Scaffold_1817 - View
Capsella rubella Carub.0008s0053 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) scaffold_8 + View
Capsella rubella Carub.0007s2387 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) scaffold_7 - View
Capsella rubella Carub.0007s2451 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) scaffold_7 - View
Daucus carota DCAR_029471 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv21687 GWHABJS00000017 + View
Davidia involucrata Dinv28852 GWHABJS00000003 + View
Davidia involucrata Dinv43611 GWHABJS00000016 - View
Davidia involucrata Dinv44058 GWHABJS00000020 - View
Durio zibethinus Duzib205G0586 NW_019168381.1 - View
Durio zibethinus Duzib084G0208 NW_019167827.1 - View
Durio zibethinus Duzib068G1311 NW_019167838.1 - View
Erigeron canadensis ECA233G0654 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA240G0458 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.D02118 Chr04 + View
Erythranthe guttata Migut.A01034 scaffold_1 + View
Erythranthe guttata Migut.B01530 scaffold_2 - View
Eutrema salsugineum Thhalv10000938m.g K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) scaffold_20 - View
Eutrema salsugineum Thhalv10025552m.g PTHR12299 - HYALURONIC ACID-BINDING PROTEIN 4 scaffold_1 - View
Eutrema salsugineum Thhalv10025512m.g K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) scaffold_1 - View
Fragaria x ananassa FAN03G2297 PTHR12299//PTHR12299:SF24 - HYALURONIC ACID-BINDING PROTEIN 4 // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN10G3725 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb7-1 + View
Fragaria x ananassa FAN04G2274 PTHR12299//PTHR12299:SF24 - HYALURONIC ACID-BINDING PROTEIN 4 // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria x ananassa FAN08G3266 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb5-3 - View
Fragaria x ananassa FAN13G1753 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb5-2 + View
Fragaria x ananassa FAN18G3763 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb5-1 + View
Fragaria vesca FvH4_7g10280 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb7 + View
Fragaria vesca FvH4_5g20020 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Fvb5 + View
Gossypium hirsutum Gohir.A08G166200 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) A08 - View
Gossypium hirsutum Gohir.D08G185100 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) D08 - View
Glycine max Glyma.03G110300 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Gm03 - View
Glycine max Glyma.09G243200 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Gm09 + View
Glycine max Glyma.07G114600 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Gm07 + View
Gossypium raimondii Gorai.004G194400 Chr04 - View
Lupinus albus Lalb_Chr19g0126511 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Lalb_Chr19 - View
Lotus japonicus Lj3g0008598 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) chr3 - View
Lonicera japonica Lj2C226G6 GWHAAZE00000002 + View
Lonicera japonica Lj7A548T43 GWHAAZE00000007 + View
Lonicera japonica Lj8A275G67 GWHAAZE00000008 + View
Lonicera japonica Lj9A555T37 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_3_126861 Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_6_94060 Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_6_68740 Lsat_1_v8_lg_6 + View
Magnolia biondii MBI04_g22922_MAGBIO AED:0.05 Chr04 - View
Malus domestica MD04G1050100 Hyaluronan / mRNA binding family Chr04 + View
Malus domestica MD06G1049800 Hyaluronan / mRNA binding family Chr06 - View
Manihot esculenta Manes.05G055400 Chromosome05 + View
Manihot esculenta Manes.01G086200 Chromosome01 + View
Manihot esculenta Manes.02G043300 Chromosome02 + View
Medicago truncatula Medtr8g006960 nuclear RNA-binding-like protein chr8 + View
Nelumbo nucifera Nn6g33814 chr6 - View
Nicotiana tabacum Nitab4.5_0000506g0020 Hyaluronan/mRNA-binding protein, Stm1, N-terminal Nitab4.5_0000506 + View
Nicotiana tabacum Nitab4.5_0006594g0050 Hyaluronan/mRNA-binding protein Nitab4.5_0006594 + View
Nicotiana tabacum Nitab4.5_0000185g0150 Hyaluronan/mRNA-binding protein, Stm1, N-terminal Nitab4.5_0000185 + View
Olea europaea Oeu040683.3 scaffold372 - View
Petunia axillaris Peaxi162Scf00190g01013 Hyaluronan / mRNA binding family Peaxi162Scf00190 - View
Petunia axillaris Peaxi162Scf00102g00839 Hyaluronan / mRNA binding family Peaxi162Scf00102 - View
Punica granatum PGR042G1184 NC_045130.1 - View
Punica granatum PGR031G0446 NC_045127.1 - View
Prunus persica Prupe.5G060200 Pp05 - View
Prunus persica Prupe.2G132500 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Pp02 + View
Pisum sativum Psat4g224720 Hyaluronan / mRNA binding family chr4LG4 - View
Papaver somniferum PSO782G3687 NC_039365.1 - View
Papaver somniferum PSO063G4392 NC_039364.1 + View
Populus trichocarpa Potri.014G049300 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr14 + View
Populus trichocarpa Potri.002G138300 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr02 + View
Populus trichocarpa Potri.003G081600 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr03 + View
Populus trichocarpa Potri.001G153000 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr01 - View
Phaseolus vulgaris Phvul.010G049300 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Chr10 - View
Quercus lobata QL04p030014 4 - View
Quercus lobata QL12p009567 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0204831 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim01G0141100 chr01 + View
Rhododendron simsii Rhsim07G0117800 chr07 + View
Striga asiatica SGA_v2.0_scaffold199G41235 scaffold199 + View
Striga asiatica SGA_v2.0_scaffold104G30211 scaffold104 + View
Salvia bowleyana SalBow5G0459 GWHASIU00000003 + View
Salix brachista Sabra03G0052600 GWHAAZH00000003 + View
Salix brachista Sabra01G0122800 GWHAAZH00000001 - View
Salix brachista Sabra02G0107900 GWHAAZH00000002 - View
Simmondsia chinensis Sc01g0008170 GWHAASQ00000001 - View
Simmondsia chinensis Sc22g0001090 GWHAASQ00000022 + View
Sechium edule Sed0001913 LG05 + View
Sechium edule Sed0021627 LG01 + View
Solanum lycopersicum Solyc08g007220.3 Hyaluronan/mRNA-binding protein (AHRD V3.3 *** A0A200QJ96_9MAGN) SL4.0ch08 - View
Solanum lycopersicum Solyc01g090190.3 Nuclear RNA binding protein (AHRD V3.3 *** C7TPG6_SOLTU) SL4.0ch01 - View
Schrenkiella parvula Sp7g17250 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) ch7-4 - View
Schrenkiella parvula Sp2g12010 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) ch2-4 - View
Schrenkiella parvula Sp7g16640 K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) ch7-4 - View
Solanum pennellii Sopen08g003170 Hyaluronan / mRNA binding family | FUNCTIONS IN: RNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein | BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family Spenn-ch08 - View
Solanum pennellii Sopen01g035980 Hyaluronan / mRNA binding family | FUNCTIONS IN: RNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein | BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400020488 Nuclear RNA binding protein ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400025998 Nuclear RNA binding protein ST4.03ch01 - View
Trochodendron aralioides TAR629G2824 group0 - View
Trochodendron aralioides TAR375G0305 group15 - View
Trochodendron aralioides TAR374G1144 group12 - View
Theobroma cacao Thecc.03G244100 Hyaluronan / mRNA binding family Chromosome_3 - View
Theobroma cacao Thecc.01G395600 Hyaluronan / mRNA binding family Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807919 plasminogen activator inhibitor 1 RNA-binding protein-like NW_010963717.1 + View
Tripterygium wilfordii TWI59G1071 NC_052248.1 - View
Tripterygium wilfordii TWI60G0908 NC_052246.1 - View
Tripterygium wilfordii TWI81G0055 NC_052251.1 + View
Vaccinium macrocarpon vmacro00034 Similar to RggA: RGG repeats nuclear RNA binding protein A (Fragment) (Nicotiana tabacum OX%3D4097) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14134 Similar to RGGB: RGG repeats nuclear RNA binding protein B (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0355 CM024070.1 + View
Vigna mungo VMungo0331G1076 CM024078.1 - View
Vitis vinifera GSVIVG01018290001 chr15 - View