Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G17580 LG-5 - View
Actinidia chinensis Actinidia35950 Lachesis_group8 + View
Actinidia chinensis Actinidia39954 Lachesis_group17 - View
Arabidopsis lyrata AL8G22040 scaffold_8 + View
Arabidopsis thaliana AT5G48870 Small nuclear ribonucleoprotein family protein SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing%2C export%2C and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination%2C root growth%2C and the expression of some stress-responsive genes. SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1)%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC04g23758 ChrC04 - View
Brassica napus C09p04970 C09 + View
Brassica napus A09p04660 A09 + View
Cannabis sativa CANSAT01G0689 NC_044373.1 + View
Corylus avellana Haze_24774 Similar to LSM5: Sm-like protein LSM5 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g17260 U6 snRNA-associated Sm-like protein LSm5 chr1 - View
Citrus clementina Ciclev10022785m.g scaffold_3 + View
Ceratophyllum demersum CDE02G4734 1 - View
Cardamine hirsuta CARHR182850 U6 snRNA-associated Sm-like protein LSm5 Chr6 - View
Carya illinoinensis CiPaw.03G151500 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) Chr03 + View
Carya illinoinensis CiPaw.04G107000 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) Chr04 + View
Citrullus lanatus ClCG07G001790 U6 snRNA-associated Sm-like protein LSm5 CG_Chr07 - View
Capsella rubella Carub.0008s0859 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) scaffold_8 + View
Cucumis sativus L. CsaV3_3G028790 U6 snRNA-associated Sm-like protein LSm5 chr3 + View
Daucus carota DCAR_000537 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv04668 GWHABJS00000007 + View
Davidia involucrata Dinv19219 GWHABJS00000010 - View
Durio zibethinus Duzib133G0821 NW_019167938.1 - View
Durio zibethinus Duzib138G1451 NW_019167893.1 - View
Erigeron canadensis ECA236G1627 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.D00519 scaffold_4 + View
Eutrema salsugineum Thhalv10005202m.g K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) scaffold_6 + View
Gossypium hirsutum Gohir.D11G142400 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) D11 - View
Gossypium hirsutum Gohir.A11G136000 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) A11 - View
Gossypium hirsutum Gohir.A07G155600 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) A07 - View
Gossypium hirsutum Gohir.D07G162000 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) D07 - View
Gossypium raimondii Gorai.007G152700 Chr07 - View
Gossypium raimondii Gorai.001G185300 Chr01 - View
Helianthus annuus HanXRQChr04g0110651 Probable small nuclear ribonucleoprotein family protein HanXRQChr04 + View
Helianthus annuus HanXRQChr10g0287281 Putative LSM domain HanXRQChr10 + View
Lactuca sativa Lsat_1_v5_gn_8_90161 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) Lsat_1_v8_lg_8 - View
Malus domestica MD05G1178700 Small nuclear ribonucleoprotein family protein Chr05 + View
Manihot esculenta Manes.13G044200 Chromosome13 - View
Manihot esculenta Manes.12G042100 Chromosome12 - View
Petunia axillaris Peaxi162Scf00047g01222 U6 snRNA-associated Sm-like protein LSm5 Peaxi162Scf00047 + View
Punica granatum PGR044G2430 NC_045134.1 - View
Prunus persica Prupe.8G205100 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) Pp08 + View
Quercus lobata QL09p044611 9 - View
Rhododendron simsii Rhsim02G0053600 chr02 - View
Striga asiatica SGA_v2.0_scaffold8G04653 scaffold8 - View
Salvia bowleyana SalBow3G3780 GWHASIU00000006 + View
Simmondsia chinensis Sc05g0002390 GWHAASQ00000005 - View
Sechium edule Sed0006654 LG05 - View
Sechium edule Sed0024440 LG01 + View
Solanum lycopersicum Solyc09g091500.3 U6 snRNA-associated Sm-like protein LSm5 (AHRD V3.3 *** A0A1U8F707_CAPAN) SL4.0ch09 - View
Schrenkiella parvula Sp2g19260 K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5) ch2-4 + View
Solanum pennellii Sopen09g034430 SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. | SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1) | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400029651 Sm ST4.03ch09 - View
Selenicereus undatus Hund05521 Scaffold_19641 + View
Trochodendron aralioides TAR365G0710 group16 + View
Trochodendron aralioides TAR636G3017 group1 + View
Theobroma cacao Thecc.01G228800 Small nuclear ribonucleoprotein family protein Chromosome_1 + View