Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019297 PREDICTED: beta-adaptin-like protein C [Solanum lycopersicum] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G6650 LG-6 - View
Aethionema arabicum Aa31LG9G10850 LG-9 - View
Acer truncatum Atru.chr9.2154 chr9 + View
Actinidia chinensis Actinidia27374 Lachesis_group14 - View
Actinidia chinensis Actinidia33743 Lachesis_group20 - View
Arabidopsis lyrata AL6G45790 scaffold_6 + View
Arabidopsis lyrata AL7G30000 scaffold_7 + View
Avicennia marina MSTRG.1854 ScioBoG_102834_HRSCAF_103055 + View
Amaranthus hybridus Ah.07g196400 Beta-adaptin-like protein C (At-bC-Ad) (At-betaC-Ad) (AP complex subunit beta-C) (Adaptor protein complex AP subunit beta-C) (Beta-adaptin C) (Clathrin assembly protein complex beta large chain C) AmaHy_arrow1_Scaffold_7 - View
Arabidopsis thaliana AT4G11380 Adaptin family protein Adaptin family protein%3B FUNCTIONS IN: protein transporter activity%2C clathrin binding%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%2C protein transport%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Clathrin adaptor%2C alpha/beta/gamma-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR008152)%2C Armadillo-like helical (InterPro:IPR011989)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%2C Clathrin adaptor%2C beta-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR013037)%2C Clathrin adaptor%2C beta-adaptin%2C appendage%2C C-terminal subdomain (InterPro:IPR015151)%2C Beta2-adaptin/TATA-box binding%2C C-terminal (InterPro:IPR012295)%2C Armadillo-type fold (InterPro:IPR016024)%2C Adaptor protein complex%2C beta subunit (InterPro:IPR016342)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C C-terminal subdomain (InterPro:IPR009028)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C Ig-like subdomain (InterPro:IPR013041)%3B BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1)%3B Has 3548 Blast hits to 3463 proteins in 290 species: Archae - 10%3B Bacteria - 21%3B Metazoa - 1495%3B Fungi - 876%3B Plants - 441%3B Viruses - 0%3B Other Eukaryotes - 705 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G23460 Adaptin family protein Adaptin family protein%3B FUNCTIONS IN: protein transporter activity%2C clathrin binding%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%2C protein transport%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Clathrin adaptor%2C alpha/beta/gamma-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR008152)%2C Armadillo-like helical (InterPro:IPR011989)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%2C Clathrin adaptor%2C beta-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR013037)%2C Clathrin adaptor%2C beta-adaptin%2C appendage%2C C-terminal subdomain (InterPro:IPR015151)%2C Beta2-adaptin/TATA-box binding%2C C-terminal (InterPro:IPR012295)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C C-terminal subdomain (InterPro:IPR009028)%2C Adaptor protein complex%2C beta subunit (InterPro:IPR016342)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C Ig-like subdomain (InterPro:IPR013041)%3B BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G11380.1)%3B Has 3513 Blast hits to 3431 proteins in 288 species: Archae - 10%3B Bacteria - 22%3B Metazoa - 1477%3B Fungi - 873%3B Plants - 441%3B Viruses - 0%3B Other Eukaryotes - 690 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC04g21134 ChrC04 + View
Brassica carinata BcaB01g01638 ChrB01 + View
Brassica carinata BcaNung04479 Contig1593 - View
Brassica napus A03p54320 A03 - View
Brassica napus C09p35180 C09 - View
Brassica napus C07p52720 C07 - View
Brassica napus A09p27770 A09 - View
Brassica oleracea BolC9t56364H C9 - View
Brassica oleracea BolC7t45772H C7 - View
Brassica rapa BraA03t14494Z A03 - View
Brassica rapa BraA09t38347Z A09 - View
Beta vulgaris EL10Ac5g12803 K12392 - AP-1 complex subunit beta-1 (AP1B1) Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G532.6 PGAv.1.6.scaffold532 - View
Corylus avellana Haze_08813 Similar to BETAC-AD: Beta-adaptin-like protein C (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g15000 Beta-adaptin-like protein C chr8 - View
Citrus clementina Ciclev10018786m.g scaffold_3 + View
Carpinus fangiana Cfa012203 Cfa05 + View
Cardamine hirsuta CARHR230790 AP-2 complex subunit beta Chr7 - View
Cardamine hirsuta CARHR255190 AP-2 complex subunit beta-1, putative Chr8 - View
Carya illinoinensis CiPaw.12G091200 K12392 - AP-1 complex subunit beta-1 (AP1B1) Chr12 + View
Citrullus lanatus ClCG01G002530 AP-2 complex subunit beta-1, putative CG_Chr01 + View
Cucumis melo MELO3C005693.2 Beta-adaptin-like protein chr09 - View
Carica papaya Cpa.g.sc180.10 supercontig_180 - View
Chenopodium quinoa AUR62010715 BETAC-AD: Beta-adaptin-like protein C C_Quinoa_Scaffold_1280 - View
Capsella rubella Carub.0006s3029 K12392 - AP-1 complex subunit beta-1 (AP1B1) scaffold_6 + View
Capsella rubella Carub.0007s1765 K12392 - AP-1 complex subunit beta-1 (AP1B1) scaffold_7 - View
Cucumis sativus L. CsaV3_5G002640 AP complex subunit beta chr5 + View
Daucus carota DCAR_008367 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv38922 GWHABJS00000003 + View
Durio zibethinus Duzib068G1315 NW_019167838.1 - View
Durio zibethinus Duzib084G0730 NW_019167827.1 - View
Durio zibethinus Duzib205G0508 NW_019168381.1 - View
Erigeron canadensis ECA240G1636 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA233G5934 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.D01829 Chr04 + View
Erythranthe guttata Migut.E01190 scaffold_5 - View
Eutrema salsugineum Thhalv10024360m.g K12392 - AP-1 complex subunit beta-1 (AP1B1) scaffold_1 + View
Eutrema salsugineum Thhalv10028407m.g K12392 - AP-1 complex subunit beta-1 (AP1B1) scaffold_3 - View
Fragaria x ananassa FAN08G0671 K12392 - AP-1 complex subunit beta-1 (AP1B1) Fvb5-3 + View
Fragaria x ananassa FAN04G0007 K12392 - AP-1 complex subunit beta-1 (AP1B1) Fvb5-4 - View
Fragaria x ananassa FAN13G1114 K12392 - AP-1 complex subunit beta-1 (AP1B1) Fvb5-2 - View
Fragaria x ananassa FAN18G3406 K12392 - AP-1 complex subunit beta-1 (AP1B1) Fvb5-1 + View
Fragaria vesca FvH4_5g02830 K12392 - AP-1 complex subunit beta-1 (AP1B1) Fvb5 - View
Gossypium hirsutum Gohir.D08G202500 K12392 - AP-1 complex subunit beta-1 (AP1B1) D08 - View
Gossypium hirsutum Gohir.D03G149700 K12392 - AP-1 complex subunit beta-1 (AP1B1) D03 + View
Gossypium hirsutum Gohir.A03G019300 K12392 - AP-1 complex subunit beta-1 (AP1B1) A03 - View
Gossypium hirsutum Gohir.A08G184000 PTHR11134//PTHR11134:SF14 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT // SUBFAMILY NOT NAMED A08 - View
Gossypium raimondii Gorai.003G157000 Chr03 + View
Gossypium raimondii Gorai.004G213900 Chr04 - View
Lonicera japonica Lj8A218T22 GWHAAZE00000008 + View
Lonicera japonica Lj2C182T2 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_3_6140 K12392 - AP-1 complex subunit beta-1 (AP1B1) Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_6_86320 K12392 - AP-1 complex subunit beta-1 (AP1B1) Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_6_5441 Lsat_1_v8_lg_6 + View
Malus domestica MD14G1108600 Adaptin family protein Chr14 - View
Malus domestica MD06G1087800 Adaptin family protein Chr06 - View
Olea europaea Oeu011033.1 chr19 + View
Olea europaea Oeu042339.1 chr13 - View
Petunia axillaris Peaxi162Scf00074g02036 AP-1 complex subunit beta Peaxi162Scf00074 + View
Prunus persica Prupe.5G103900 K12392 - AP-1 complex subunit beta-1 (AP1B1) Pp05 - View
Populus trichocarpa Potri.003G130400 K12392 - AP-1 complex subunit beta-1 (AP1B1) Chr03 - View
Populus trichocarpa Potri.001G101400 K12392 - AP-1 complex subunit beta-1 (AP1B1) Chr01 + View
Quercus lobata QL12p032420 12 + View
Rosa chinensis RcHm_v2.0_Chr7g0197091 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0088700 chr07 + View
Striga asiatica SGA_v2.0_scaffold144G35913 scaffold144 - View
Salvia bowleyana SalBow1G3543 GWHASIU00000001 + View
Salix brachista Sabra03G0092700 GWHAAZH00000003 - View
Salix brachista Sabra01G0076400 GWHAAZH00000001 + View
Simmondsia chinensis Sc01g0009710 GWHAASQ00000001 - View
Sechium edule Sed0001016 LG05 + View
Solanum lycopersicum Solyc08g081320.3 Beta-adaptin-like protein (AHRD V3.3 *** A0A2G2XJQ8_CAPBA) SL4.0ch08 - View
Schrenkiella parvula Sp7g21360 K12392 - AP-1 complex subunit beta-1 (AP1B1) ch7-4 - View
Schrenkiella parvula Sp6g06070 K12392 - AP-1 complex subunit beta-1 (AP1B1) ch6-1 - View
Solanum pennellii Sopen08g029630 Adaptin family protein | FUNCTIONS IN: protein transporter activity, clathrin binding, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain , Armadillo-like helical , Clathrin/coatomer adaptor, adaptin-like, N-terminal , Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain , Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain , Beta2-adaptin/TATA-box binding, C-terminal , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain , Adaptor protein complex, beta subunit , Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain | BEST Arabidopsis thaliana protein match is: Adaptin family protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400012194 AP-2 complex subunit beta-1 ST4.03ch08 - View
Selenicereus undatus Hund14840 Scaffold_33677 - View
Theobroma cacao Thecc.03G282700 Adaptin family protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104813023 beta-adaptin-like protein C isoform X1 NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104806416 beta-adaptin-like protein C isoform X2 NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104814663 beta-adaptin-like protein C NW_010960187.1 - View
Tripterygium wilfordii TWI60G1699 NC_052246.1 + View
Vitis vinifera GSVIVG01019391001 chr2 - View