Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022868 PREDICTED: zinc finger CCCH domain-containing protein 44 [Prunus mume] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13810 LG-8 - View
Acer truncatum Atru.chr5.3136 chr5 - View
Acer truncatum Atru.chr3.765 chr3 - View
Actinidia chinensis Actinidia11771 Lachesis_group25 + View
Actinidia chinensis Actinidia00570 Lachesis_group12 + View
Arabidopsis lyrata AL5G31540 scaffold_5 - View
Arabidopsis lyrata AL3G52680 scaffold_3 - View
Avicennia marina MSTRG.23284 ScioBoG_3895_HRSCAF_3912 - View
Amaranthus hybridus Ah.03g141560 AmaHy_arrow1_Scaffold_3 - View
Amaranthus hybridus Ah.02g124650 Zinc finger CCCH domain-containing protein 44 (AtC3H44) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy5G01492 CHR05 + View
Aquilegia oxysepala Aqoxy6G02384 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MF3J08 PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MSJ6DP PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FL369X PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MV74CA PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT2G16485 GW repeat- and PHD finger-containing protein NERD Encodes NERD (Needed for RDR2-independent DNA methylation)%2C a plant-specific GW repeat- and PHD finger-containing protein involved in siRNA-dependent DNA methylation. nucleic acid binding%3Bzinc ion binding%3BDNA binding%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: histone modification%2C transcription initiation%3B LOCATED IN: nucleus%3B EXPRESSED IN: guard cell%2C cultured cell%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Plus-3 domain%2C subgroup (InterPro:IPR018144)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C GYF (InterPro:IPR003169)%2C SWIB/MDM2 domain (InterPro:IPR003121)%2C Plus-3 (InterPro:IPR004343)%2C SWIB domain (InterPro:IPR019835)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: DNA binding%3Bzinc ion binding%3Bnucleic acid binding%3Bnucleic acid binding (TAIR:AT3G51120.1)%3B Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670%3B Bacteria - 4778%3B Metazoa - 14464%3B Fungi - 4561%3B Plants - 3104%3B Viruses - 298%3B Other Eukaryotes - 10482 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G51120 zinc finger CCCH domain-containing protein 44 DNA binding%3Bzinc ion binding%3Bnucleic acid binding%3Bnucleic acid binding%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: histone modification%2C transcription initiation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Plus-3 domain%2C subgroup (InterPro:IPR018144)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C GYF (InterPro:IPR003169)%2C SWIB/MDM2 domain (InterPro:IPR003121)%2C Plus-3 (InterPro:IPR004343)%2C SWIB domain (InterPro:IPR019835)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: nucleic acid binding%3Bzinc ion binding%3BDNA binding (TAIR:AT2G16485.1)%3B Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0%3B Bacteria - 308%3B Metazoa - 909%3B Fungi - 193%3B Plants - 493%3B Viruses - 18%3B Other Eukaryotes - 406 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB03g16364 ChrB03 - View
Beta vulgaris EL10As8g23851 PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Scaffold_0008 + View
Beta vulgaris EL10Ac9g21648 PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Chr9_EL10_PGA_scaffold8 + View
Cannabis sativa CANSAT11G1190 NC_044377.1 + View
Cannabis sativa CANSAT01G1453 NC_044373.1 - View
Cicer arietinum L. Ca_24896_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03809 Similar to At3g51120: Zinc finger CCCH domain-containing protein 44 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g10400 Nuclear receptor binding set domain containing protein 1, nsd, putative chr7 - View
Coffea canephora Cc02_g16990 Putative Zinc finger CCCH domain-containing protein 19 chr2 + View
Citrus clementina Ciclev10027673m.g scaffold_8 - View
Citrus clementina Ciclev10024691m.g scaffold_7 + View
Carpinus fangiana Cfa006940 Cfa02 - View
Cardamine hirsuta CARHR160720 Zinc finger CCCH domain-containing protein 44 Chr5 - View
Cardamine hirsuta CARHR106710 Zinc finger CCCH domain-containing protein Chr3 - View
Carya illinoinensis CiPaw.08G135500 PF02213//PF03126 - GYF domain (GYF) // Plus-3 domain (Plus-3) Chr08 + View
Citrullus lanatus ClCG02G004620 Zinc finger CCCH domain-containing protein CG_Chr02 + View
Cucumis melo MELO3C013424.2 zinc finger CCCH domain-containing protein 19 chr01 + View
Corchorus olitorius COL.COLO4_26035 hypothetical protein AWUE01019203.1 - View
Carica papaya Cpa.g.sc150.23 supercontig_150 + View
Carica papaya Cpa.g.sc6.213 supercontig_6 - View
Chenopodium quinoa AUR62010399 NERD: Zinc finger CCCH domain-containing protein 19 C_Quinoa_Scaffold_1257 + View
Chenopodium quinoa AUR62007650 NERD: Zinc finger CCCH domain-containing protein 19 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0005s1752 scaffold_5 - View
Capsella rubella Carub.0003s3025 PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED scaffold_3 - View
Cucumis sativus L. CsaV3_7G000340 zinc finger CCCH domain-containing protein 19 chr7 - View
Daucus carota DCAR_022912 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_017341 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv23460 GWHABJS00000005 + View
Davidia involucrata Dinv42005 GWHABJS00000002 - View
Davidia involucrata Dinv40057 GWHABJS00000014 + View
Davidia involucrata Dinv33601 GWHABJS00000012 - View
Durio zibethinus Duzib132G0594 NW_019167915.1 + View
Durio zibethinus Duzib264G0704 NW_019167960.1 - View
Durio zibethinus Duzib147G0672 NW_019168470.1 - View
Durio zibethinus Duzib052G0725 NW_019167849.1 - View
Durio zibethinus Duzib248G0445 NW_019168048.1 - View
Erigeron canadensis ECA246G1141 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA233G4053 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.G01725 Chr07 - View
Erythranthe guttata Migut.H02481 scaffold_8 + View
Erythranthe guttata Migut.B00181 scaffold_2 + View
Fragaria x ananassa FAN26G0297 PF00642//PF02201//PF02213//PF03126 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) Fvb1-2 + View
Fragaria x ananassa FAN24G0635 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Fvb2-2 + View
Fragaria x ananassa FAN20G0265 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Fvb2-3 + View
Fragaria x ananassa FAN19G1544 PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Fvb1-4 + View
Fragaria x ananassa FAN28G1501 PF00642//PF02201//PF02213//PF03126 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) Fvb1-1 - View
Fragaria x ananassa FAN15G1757 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Fvb2-4 - View
Fragaria vesca FvH4_2g10320 PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A11G177900 PF02201//PF02213//PF03126 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) A11 + View
Gossypium hirsutum Gohir.D11G185700 PF02201//PF02213//PF03126 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) D11 + View
Gossypium hirsutum Gohir.D02G220300 PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED D02 - View
Gossypium hirsutum Gohir.A03G198900 PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED A03 - View
Glycine max Glyma.01G168900 PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Gm01 + View
Glycine max Glyma.11G074400 PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Gm11 - View
Gossypium raimondii Gorai.005G248200 Chr05 - View
Gossypium raimondii Gorai.007G197200 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0851F.1_g228220 Hma1.2p1_0851F.1 + View
Lupinus albus Lalb_Chr23g0265171 PTHR14445//PTHR14445:SF44 - GRB10 INTERACTING GYF PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr23 - View
Lotus japonicus Lj2g0025009 PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN chr2 - View
Lonicera japonica Lj5C190G5 GWHAAZE00000005 + View
Lonicera japonica Lj2A462G17 GWHAAZE00000002 - View
Lonicera japonica Lj4A215G51 GWHAAZE00000004 - View
Lonicera japonica Lj9A382T65 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_3_44121 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_3_73641 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_8_128721 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Lsat_1_v8_lg_8 + View
Magnolia biondii MBI05_g44712_MAGBIO AED:0.50 Chr05 + View
Malus domestica MD15G1249200 nucleic acid binding Chr15 + View
Malus domestica MD10G1064000 nucleic acid binding Chr10 + View
Malus domestica MD02G1135700 DNA binding Chr02 + View
Malus domestica MD00G1040500 nucleic acid binding Chr00 + View
Manihot esculenta Manes.01G142800 Chromosome01 - View
Manihot esculenta Manes.02G101200 Chromosome02 - View
Manihot esculenta Manes.04G084000 Chromosome04 + View
Medicago truncatula Medtr5g021450 GYF domain protein chr5 - View
Medicago truncatula Medtr3g117490 zinc finger CCCH domain protein chr3 + View
Nelumbo nucifera Nn5g29211 chr5 - View
Olea europaea Oeu055627.1 chr15 - View
Olea europaea Oeu036637.1 chr3 - View
Olea europaea Oeu020692.1 chr5 - View
Olea europaea Oeu046136.1 chr16 + View
Petunia axillaris Peaxi162Scf00083g01229 Zinc finger CCCH domain-containing protein 44 Peaxi162Scf00083 + View
Punica granatum PGR102G2187 NC_045129.1 + View
Punica granatum PGR119G0579 NC_045132.1 + View
Punica granatum PGR042G1088 NC_045130.1 + View
Prunus persica Prupe.8G085700 PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Pp08 + View
Prunus persica Prupe.7G165000 PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Pp07 - View
Pisum sativum Psat5g004280 Plus-3 domain chr5LG3 - View
Pisum sativum Psat2g155760 Plus-3 domain chr2LG1 - View
Papaver somniferum PSO170G6368 NC_039360.1 + View
Papaver somniferum PSO210G2352 NC_039359.1 - View
Populus trichocarpa Potri.009G123800 PTHR14445//PTHR14445:SF44//PTHR22884//PTHR22884:SF374 - GRB10 INTERACTING GYF PROTEIN // SUBFAMILY NOT NAMED // SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Chr09 - View
Populus trichocarpa Potri.007G016000 PTHR14445//PTHR14445:SF44//PTHR22884//PTHR22884:SF339 - GRB10 INTERACTING GYF PROTEIN // SUBFAMILY NOT NAMED // SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Chr07 + View
Populus trichocarpa Potri.004G161700 KOG1862 - GYF domain containing proteins Chr04 - View
Populus trichocarpa Potri.005G117300 PTHR14445//PTHR14445:SF44//PTHR22884//PTHR22884:SF339 - GRB10 INTERACTING GYF PROTEIN // SUBFAMILY NOT NAMED // SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Chr05 + View
Quercus lobata QL06p033989 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0099921 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr6g0267521 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0183100 chr11 - View
Striga asiatica SGA_v2.0_scaffold32G13215 scaffold32 - View
Salvia bowleyana SalBow8G0912 GWHASIU00000004 - View
Salix brachista Sabra07G0013200 GWHAAZH00000007 + View
Salix brachista Sabra04G0108700 GWHAAZH00000004 - View
Simmondsia chinensis Sc03g0003430 GWHAASQ00000003 - View
Simmondsia chinensis Sc16g0002380 GWHAASQ00000016 + View
Simmondsia chinensis Sc08g0000830 GWHAASQ00000008 - View
Sechium edule Sed0010303 LG04 + View
Sechium edule Sed0010772 LG05 + View
Sapria himalayana SHI05605 scaffold8_16897533 - View
Solanum lycopersicum Solyc02g084510.3 Zinc finger CCCH domain-containing protein 19 (AHRD V3.3 *-* A0A2G2XGC4_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp3g29760 PF00642//PF02201//PF02213//PF03126 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) ch3-5 - View
Solanum pennellii Sopen02g029200 DNA binding, zinc ion binding, nucleic acid binding, nucleic acid binding | FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding | INVOLVED IN: histone modification, transcription initiation | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Plus-3 domain, subgroup , Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , GYF , SWIB/MDM2 domain , Plus-3 , SWIB domain , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: nucleic acid binding, zinc ion binding, DNA binding Spenn-ch02 + View
Solanum pennellii Sopen02g013360 nucleic acid binding, zinc ion binding, DNA binding | FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding | INVOLVED IN: histone modification, transcription initiation | LOCATED IN: nucleus | EXPRESSED IN: guard cell, cultured cell | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Zinc finger, PHD-type, conserved site , Plus-3 domain, subgroup , Zinc finger, PHD-type , GYF , SWIB/MDM2 domain , Plus-3 , SWIB domain , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: DNA binding, zinc ion binding, nucleic acid binding, nucleic acid binding Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400003622 Nuclear receptor binding set domain containing protein 1, nsd ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG401012010 Nuclear receptor binding set domain containing protein 1, nsd ST4.03ch02 + View
Selenicereus undatus Hund14029 Scaffold_33679 - View
Selenicereus undatus Hund16475 Scaffold_33677 - View
Selenicereus undatus Hund06279 Scaffold_33676 - View
Trochodendron aralioides TAR625G0367 group4 + View
Trochodendron aralioides TAR381G1479 group11 + View
Trochodendron aralioides TAR628G0617 group5 - View
Theobroma cacao Thecc.01G023200 Nuclear receptor binding set domain containing protein 1 Chromosome_1 + View
Theobroma cacao Thecc.02G076000 Nucleic acid binding Chromosome_2 + View
Trifolium pratense TPR.G2360 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI73G0969 NC_052232.1 - View
Tripterygium wilfordii TWI75G1073 NC_052253.1 + View
Vaccinium macrocarpon vmacro02054 Similar to NERD: Zinc finger CCCH domain-containing protein 19 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2301 CM024072.1 + View
Vigna mungo VMungo1215G3412 CM024074.1 - View
Vitis vinifera GSVIVG01018827001 chr4 - View
Vitis vinifera GSVIVG01024181001 chr3 - View