Gene: Aa31LG8G13810

General Information

Structural Information

  • Species Aethionema arabicum
  • Gene Identifier Aa31LG8G13810
  • Transcript Identifier Aa31LG8G13810.mRNA1
  • Gene Type Coding gene
  • Location LG-8 : 8384935-8393912 : negative

Gene Family Information

  • ID HOM05D000706
  • #Genes/#Species 813/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Aa31LG8G13810.mRNA1
  • Alias Aa31LG8G13810
  • Alias Aa31LG8G13810-mRNA-1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010964
ISO
PLAZA Integrative Orthologyregulation of heterochromatin assembly by small RNA AT2G16485
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine AT2G16485

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT2G16485

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G16485
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16485

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036855 Zinc finger, CCCH-type superfamily
IPR035445 GYF-like domain superfamily
IPR036885 SWIB/MDM2 domain superfamily
IPR003121 SWIB/MDM2 domain
IPR036128 Plus3-like superfamily
IPR003169 GYF domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR004343 Plus-3 domain
IPR001965 Zinc finger, PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000571 Zinc finger, CCCH-type
Mapman id Description
12.5.1.15.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.protein factor (NERD)