Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005803 PREDICTED: uncharacterized protein LOC100259581 [Vitis vinifera] Contig766 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2610 LG-5 - View
Acer truncatum Atru.chr5.1297 chr5 + View
Arabidopsis lyrata AL6G49860 scaffold_6 + View
Avicennia marina MSTRG.18201 ScioBoG_22153_HRSCAF_22259 + View
Arabidopsis thaliana AT4G03090 sequence-specific DNA binding transcription factor ATNDX sequence-specific DNA binding%3Bsequence-specific DNA binding transcription factors%3B FUNCTIONS IN: sequence-specific DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%3B Has 162 Blast hits to 148 proteins in 59 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 30%3B Fungi - 10%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 53 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaB01g01983 ChrB01 + View
Brassica carinata BcaC03g16206 ChrC03 - View
Brassica carinata BcaB01g01939 ChrB01 - View
Brassica napus A09p02400 A09 - View
Brassica napus C09p02500 C09 - View
Brassica oleracea BolC9t53180H C9 - View
Brassica oleracea BolC2t10009H C2 - View
Brassica rapa BraA02t07497Z A02 - View
Brassica rapa BraA09t35887Z A09 - View
Capsicum annuum CAN.G426.9 PGAv.1.6.scaffold426 - View
Cannabis sativa CANSAT25G1777 NC_044370.1 - View
Corylus avellana Haze_04796 Similar to NDX: Nodulin homeobox (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20080 Putative sequence-specific DNA binding;sequence-specific DNA binding transcription factors chr1 - View
Citrus clementina Ciclev10018730m.g scaffold_3 - View
Ceratophyllum demersum CDE11G0573 9 + View
Carpinus fangiana Cfa006055 Cfa02 + View
Cardamine hirsuta CARHR251510 Sequence-specific DNA binding transcription factor Chr8 - View
Carya illinoinensis CiPaw.08G101000 PTHR35743//PTHR35743:SF1 - FAMILY NOT NAMED // SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Chr08 + View
Chenopodium quinoa AUR62034599 NDX: Nodulin homeobox C_Quinoa_Scaffold_3297 - View
Chenopodium quinoa AUR62036671 NDX: Nodulin homeobox C_Quinoa_Scaffold_3901 + View
Capsella rubella Carub.0006s3397 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR scaffold_6 + View
Daucus carota DCAR_002782 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_005834 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv11285 GWHABJS00000007 + View
Davidia involucrata Dinv32982 GWHABJS00000010 - View
Erigeron canadensis ECA236G1413 Conyza_canadensis_scaffold:3 - View
Eutrema salsugineum Thhalv10028409m.g PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR scaffold_3 - View
Fragaria x ananassa FAN27G0529 Fvb2-1 - View
Fragaria x ananassa FAN24G2516 PTHR35743//PTHR35743:SF1 - FAMILY NOT NAMED // SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Fvb2-2 + View
Fragaria x ananassa FAN20G2140 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Fvb2-3 + View
Fragaria x ananassa FAN15G0592 PTHR35743//PTHR35743:SF1 - FAMILY NOT NAMED // SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Fvb2-4 - View
Fragaria vesca FvH4_2g24490 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Fvb2 - View
Hydrangea macrophylla Hma1.2p1_0209F.1_g089230 Hma1.2p1_0209F.1 + View
Lonicera japonica Lj2A1183G17 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_189721 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_55721 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI19_g35956_MAGBIO AED:0.15 Chr19 + View
Nelumbo nucifera Nn3g21233 chr3 - View
Nicotiana tabacum Nitab4.5_0001651g0100 Homeobox domain, Homeodomain-like Nitab4.5_0001651 + View
Petunia axillaris Peaxi162Scf00006g03621 Sequence-specific DNA binding,sequence-specific DNA binding transcription factors, putative isoform 1 Peaxi162Scf00006 + View
Prunus persica Prupe.8G250800 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Pp08 - View
Papaver somniferum PSO407G0030 NW_020651082.1 + View
Populus trichocarpa Potri.014G135700 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Chr14 + View
Populus trichocarpa Potri.002G213400 Chr02 - View
Quercus lobata QL12p023448 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0292351 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0018500 chr13 + View
Striga asiatica SGA_v2.0_scaffold1G00428 scaffold1 + View
Salvia bowleyana SalBow3G1663 GWHASIU00000006 - View
Salix brachista Sabra02G0149300 GWHAAZH00000002 - View
Salix brachista Sabra14G0102100 GWHAAZH00000014 + View
Simmondsia chinensis Sc17g0003660 GWHAASQ00000017 + View
Solanum lycopersicum Solyc09g074330.3 Sequence-specific DNA binding transcription factor ATNDX (AHRD V3.3 *** A0A1P8B7M0_ARATH) SL4.0ch09 - View
Schrenkiella parvula Sp6g03120 PTHR35743:SF1 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR ch6-1 - View
Solanum pennellii Sopen09g029170 sequence-specific DNA binding, sequence-specific DNA binding transcription factors | FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox . Spenn-ch09 - View
Trochodendron aralioides TAR365G1186 group16 - View
Tarenaya hassleriana THA.LOC104801203 nodulin homeobox NW_010969548.1 + View
Vaccinium macrocarpon vmacro02517 Similar to NDX: Nodulin homeobox (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011024001 chr7 - View