Gene: vmacro02517

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro02517
  • Transcript Identifier vmacro02517-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 1910774-1931705 : positive

Gene Family Information

  • ID HOM05D003625
  • #Genes/#Species 189/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro02517_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to NDX: Nodulin homeobox (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009908
IEA
InterProflower development
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G03090
GO:0060195
ISO
PLAZA Integrative Orthologynegative regulation of antisense RNA transcription AT4G03090
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G03090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT4G03090
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G03090
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G03090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G03090
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G03090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR039325 Nodulin homeobox protein
Mapman id Description
15.5.3.11 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (NDX)