Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009916 PREDICTED: 40S ribosomal protein S9-2 [Nelumbo nucifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G4340 LG-2 + View
Acer truncatum Atru.chr9.2279 chr9 + View
Acer truncatum Atru.chr11.1824 chr11 + View
Acer truncatum Atru.chr8.138 chr8 - View
Actinidia chinensis Actinidia19044 Lachesis_group9 - View
Actinidia chinensis Actinidia36016 Lachesis_group4 - View
Actinidia chinensis Actinidia06085 Lachesis_group11 - View
Actinidia chinensis Actinidia34990 Lachesis_group2 - View
Arabidopsis lyrata AL7G50390 scaffold_7 - View
Arabidopsis lyrata AL6G26050 scaffold_6 - View
Avicennia marina MSTRG.3325 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.690 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.7811 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.03g135220 AmaHy_arrow1_Scaffold_3 + View
Amaranthus hybridus Ah.02g113330 AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy3G03340 CHR03 - View
Arabidopsis thaliana AT5G39850 Ribosomal protein S4 Ribosomal protein S4%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912)%2C Ribosomal protein S4%2C conserved site (InterPro:IPR018079)%2C Ribosomal protein S4/S9%2C eukaryotic/archaeal (InterPro:IPR005710)%2C RNA-binding S4 (InterPro:IPR002942)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1)%3B Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264%3B Bacteria - 730%3B Metazoa - 422%3B Fungi - 285%3B Plants - 4172%3B Viruses - 0%3B Other Eukaryotes - 941 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G15200 Ribosomal protein S4 Ribosomal protein S4%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912)%2C Ribosomal protein S4%2C conserved site (InterPro:IPR018079)%2C Ribosomal protein S4/S9%2C eukaryotic/archaeal (InterPro:IPR005710)%2C RNA-binding S4 (InterPro:IPR002942)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1)%3B Has 5786 Blast hits to 5783 proteins in 2880 species: Archae - 264%3B Bacteria - 571%3B Metazoa - 422%3B Fungi - 281%3B Plants - 3526%3B Viruses - 0%3B Other Eukaryotes - 722 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0564G079 AmTr_v1.0_scaffold00010 - View
Brassica carinata BcaB06g27381 ChrB06 + View
Brassica carinata BcaC03g13421 ChrC03 + View
Brassica carinata BcaB08g36917 ChrB08 + View
Brassica carinata BcaC04g18974 ChrC04 + View
Brassica napus A04p12550 A04 + View
Brassica napus C09p61940 C09 + View
Brassica napus C02p07590 C02 - View
Brassica napus A02p02950 A02 - View
Brassica napus C03p08010 C03 - View
Brassica napus A10p23650 A10 + View
Brassica napus A03p07030 A03 - View
Brassica oleracea BolC9t59033H C9 + View
Brassica oleracea BolC3t13299H C3 - View
Brassica rapa BraA03t10025Z A03 - View
Beta vulgaris EL10Ac6g13180 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_21833_v3 Ca_LG7_v3 + View
Corylus avellana Haze_14551 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_12030 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_07344 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc11_g13230 40S ribosomal protein S9-2 chr11 + View
Coffea canephora Cc07_g03270 40S ribosomal protein S9-2 chr7 - View
Citrus clementina Ciclev10032800m.g scaffold_4 - View
Citrus clementina Ciclev10013599m.g scaffold_6 + View
Carpinus fangiana Cfa009000 Cfa03 + View
Cardamine hirsuta CARHR262380 40S ribosomal protein S9 Chr8 - View
Carya illinoinensis CiPaw.03G028100 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr03 + View
Carya illinoinensis CiPaw.06G083200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr06 - View
Carya illinoinensis CiPaw.11G042400 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr11 - View
Carya illinoinensis CiPaw.05G137300 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr05 + View
Citrullus lanatus ClCG05G024390 40S ribosomal protein S9, putative CG_Chr05 + View
Cucumis melo MELO3C012084.2 40S ribosomal protein S9, putative chr10 + View
Chenopodium quinoa AUR62005753 RPS9B: 40S ribosomal protein S9-1 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62028806 RPS9B: 40S ribosomal protein S9-1 C_Quinoa_Scaffold_2837 + View
Capsella rubella Carub.0007s3588 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED scaffold_7 - View
Capsella rubella Carub.0006s1338 PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Cucumis sativus L. CsaV3_5G032570 40S ribosomal protein S9, putative chr5 - View
Daucus carota DCAR_027405 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv19942 GWHABJS00000006 + View
Davidia involucrata Dinv34169 GWHABJS00000008 + View
Davidia involucrata Dinv38689 GWHABJS00000019 + View
Davidia involucrata Dinv33747 GWHABJS00000014 - View
Durio zibethinus Duzib264G1212 NW_019167960.1 - View
Durio zibethinus Duzib187G0770 NW_019167860.1 - View
Durio zibethinus Duzib068G1197 NW_019167838.1 - View
Durio zibethinus Duzib147G0152 NW_019168470.1 + View
Erigeron canadensis ECA246G4029 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA234G2883 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.K02467 Chr11 - View
Eucalyptus grandis Eucgr.I01938 Chr09 - View
Erythranthe guttata Migut.L01311 scaffold_12 + View
Eutrema salsugineum Thhalv10014722m.g K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) scaffold_2 - View
Eutrema salsugineum Thhalv10027944m.g K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) scaffold_14 - View
Fragaria x ananassa FAN18G1251 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN02G0315 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Fvb6-4 + View
Fragaria x ananassa FAN09G2137 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Fvb6-2 - View
Fragaria x ananassa FAN05G5567 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Fvb6-3 - View
Fragaria x ananassa FAN13G0214 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria vesca FvH4_5g15210 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5 + View
Fragaria vesca FvH4_6g48920 PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D04G049600 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) D04 + View
Gossypium hirsutum Gohir.D07G211300 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) D07 - View
Gossypium hirsutum Gohir.A09G018000 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) A09 - View
Gossypium hirsutum Gohir.D09G017600 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) D09 + View
Gossypium hirsutum Gohir.A05G365200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) A05 - View
Glycine max Glyma.06G192500 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm06 - View
Glycine max Glyma.04G171400 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm04 + View
Gossypium raimondii Gorai.006G020700 Chr06 + View
Gossypium raimondii Gorai.012G055000 Chr12 + View
Gossypium raimondii Gorai.001G238700 Chr01 - View
Lonicera japonica Lj3C1039T6 GWHAAZE00000003 + View
Lonicera japonica Lju41A19G28 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_3_52680 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_4_9960 Lsat_1_v8_lg_4 - View
Magnolia biondii MBI02_g14489_MAGBIO AED:0.09 Chr02 + View
Magnolia biondii MBI05_g35468_MAGBIO AED:0.36 Chr05 + View
Malus domestica MD06G1191100 Ribosomal protein S4 Chr06 - View
Malus domestica MD09G1049700 Ribosomal protein S4 Chr09 - View
Malus domestica MD14G1197700 Ribosomal protein S4 Chr14 - View
Malus domestica MD17G1049900 Ribosomal protein S4 Chr17 - View
Manihot esculenta Manes.01G187300 Chromosome01 + View
Manihot esculenta Manes.05G099700 Chromosome05 - View
Manihot esculenta Manes.14G076800 Chromosome14 - View
Manihot esculenta Manes.06G094400 Chromosome06 + View
Punica granatum PGR142G3546 NC_045128.1 - View
Punica granatum PGR044G0780 NC_045134.1 + View
Punica granatum PGR083G2049 NC_045133.1 - View
Prunus persica Prupe.5G189800 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Pp05 - View
Prunus persica Prupe.3G269100 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Pp03 + View
Papaver somniferum PSO478G2731 NC_039361.1 + View
Phaseolus vulgaris Phvul.009G188600 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr09 + View
Phaseolus vulgaris Phvul.003G191200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr03 + View
Quercus lobata QL02p081559 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0168731 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0040200 chr10 + View
Rhododendron simsii Rhsim12G0061700 chr12 - View
Rhododendron simsii Rhsim12G0157300 chr12 + View
Striga asiatica SGA_v2.0_scaffold302G47829 scaffold302 + View
Salvia bowleyana SalBow2G2178 GWHASIU00000007 - View
Salvia bowleyana SalBow8G4344 GWHASIU00000004 - View
Simmondsia chinensis Sc04g0008270 GWHAASQ00000004 + View
Simmondsia chinensis Sc11g0001810 GWHAASQ00000011 - View
Sechium edule Sed0023187 LG04 - View
Sechium edule Sed0006209 LG06 + View
Schrenkiella parvula Sp7g02210 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) ch7-1 - View
Solanum pennellii Sopen05g003210 Ribosomal protein S4 | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 , Ribosomal protein S4, conserved site , Ribosomal protein S4/S9, eukaryotic/archaeal , RNA-binding S4 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400023058 40S ribosomal protein S9 ST4.03ch05 + View
Selenicereus undatus Hund25255 Scaffold_3410 + View
Selenicereus undatus Hund05894 Scaffold_19641 + View
Trochodendron aralioides TAR371G0018 group13 - View
Trochodendron aralioides TAR374G1278 group12 + View
Trochodendron aralioides TAR629G0370 group0 + View
Theobroma cacao Thecc.04G079700 Ribosomal protein S4 Chromosome_4 - View
Theobroma cacao Thecc.03G083800 Ribosomal protein S4 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104822362 40S ribosomal protein S9-2-like NW_010966665.1 + View
Tarenaya hassleriana THA.LOC104823912 40S ribosomal protein S9-2 NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104821032 40S ribosomal protein S9-2-like NW_010966372.1 + View
Tripterygium wilfordii TWI34G0562 NC_052235.1 + View
Tripterygium wilfordii TWI60G1632 NC_052246.1 - View
Vaccinium macrocarpon vmacro05705 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01243 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011384001 chr14 - View
Vitis vinifera GSVIVG01020020001 chr1 - View
Vitis vinifera GSVIVG01008028001 chr17 - View