Gene: Carub.0007s3588

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s3588
  • Transcript Identifier Carub.0007s3588.1
  • Gene Type Coding gene
  • Location scaffold_7 : 16401565-16402782 : negative

Gene Family Information

  • ID HOM05D001645
  • #Genes/#Species 393/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s3588.v1.1
  • pacid 39234521
  • synonym Carubv10005777m.g

Descriptions

  • Description PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
InterProRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G39850
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G39850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G39850
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G39850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal
IPR002942 RNA-binding S4 domain
IPR001912 Ribosomal protein S4/S9, N-terminal
IPR036986 RNA-binding S4 domain superfamily
IPR022801 Ribosomal protein S4/S9
Mapman id Description
17.1.3.1.10 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS9