Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G830 LG-6 - View
Acer truncatum Atru.chr10.1393 chr10 + View
Actinidia chinensis Actinidia16745 Lachesis_group12 - View
Actinidia chinensis Actinidia07669 Lachesis_group6 + View
Actinidia chinensis Actinidia19487 Lachesis_group2 - View
Arabidopsis lyrata AL7G36310 scaffold_7 + View
Aquilegia oxysepala Aqoxy1G01855 CHR01 + View
Arabidopsis thaliana AT4G18130 phytochrome E member of Histidine Kinase phytochrome E (PHYE)%3B FUNCTIONS IN: protein histidine kinase activity%2C G-protein coupled photoreceptor activity%2C signal transducer activity%3B INVOLVED IN: in 8 processes%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Phytochrome%2C central region (InterPro:IPR013515)%2C Signal transduction histidine kinase%2C core (InterPro:IPR005467)%2C PAS fold (InterPro:IPR013767)%2C PAS (InterPro:IPR000014)%2C Phytochrome chromophore attachment domain (InterPro:IPR016132)%2C ATPase-like%2C ATP-binding domain (InterPro:IPR003594)%2C PAS fold-2 (InterPro:IPR013654)%2C Phytochrome A/B/C/D/E (InterPro:IPR012129)%2C Phytochrome (InterPro:IPR001294)%2C Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain (InterPro:IPR003661)%2C Phytochrome chromophore binding site (InterPro:IPR013516)%2C GAF (InterPro:IPR003018)%3B BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1)%3B Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289%3B Bacteria - 19481%3B Metazoa - 8%3B Fungi - 476%3B Plants - 4006%3B Viruses - 9%3B Other Eukaryotes - 1122 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung00030 Contig74 + View
Brassica carinata BcaC09g51553 ChrC09 + View
Brassica napus A01p10100 A01 - View
Brassica napus C01p11920 C01 - View
Brassica oleracea BolC1t01168H C1 - View
Brassica rapa BraA01t00956Z A01 - View
Capsicum annuum CAN.G257.48 PGAv.1.6.scaffold257 + View
Cannabis sativa CANSAT35G0794 NC_044378.1 - View
Citrus clementina Ciclev10014092m.g scaffold_2 - View
Carpinus fangiana Cfa001026 Cfa01 - View
Cardamine hirsuta CARHR224870 Phytochrome Chr7 - View
Carya illinoinensis CiPaw.10G096000 K12123 - phytochrome E (PHYE) Chr10 + View
Carya illinoinensis CiPaw.09G129200 PF00360//PF00512//PF00989//PF01590//PF08446 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // PAS fold (PAS_2) Chr09 + View
Citrullus lanatus ClCG03G007180 Phytochrome CG_Chr03 + View
Cucumis melo MELO3C002705.2 Phytochrome chr12 + View
Capsella rubella Carub.0007s2321 K12123 - phytochrome E (PHYE) scaffold_7 + View
Cucumis sativus L. CsaV3_1G032770 Phytochrome chr1 + View
Davidia involucrata Dinv03628 GWHABJS00000020 + View
Davidia involucrata Dinv32297 GWHABJS00000016 + View
Durio zibethinus Duzib235G1435 NW_019167982.1 + View
Eucalyptus grandis Eucgr.D00342 Chr04 + View
Erythranthe guttata Migut.H01380 scaffold_8 - View
Eutrema salsugineum Thhalv10024375m.g K12123 - phytochrome E (PHYE) scaffold_1 + View
Fragaria x ananassa FAN21G1405 PTHR24423:SF563 - PHYTOCHROME E Fvb3-2 - View
Fragaria x ananassa FAN16G0063 PF00360//PF00512//PF00989//PF02518 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) Fvb3-3 + View
Fragaria x ananassa FAN11G2971 K12123 - phytochrome E (PHYE) Fvb3-4 - View
Gossypium hirsutum Gohir.A10G037800 K12123 - phytochrome E (PHYE) A10 - View
Gossypium hirsutum Gohir.D10G038800 K12123 - phytochrome E (PHYE) D10 - View
Gossypium raimondii Gorai.011G040900 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0012F.1_g007560 Hma1.2p1_0012F.1 + View
Lonicera japonica Lj1A1182G81 GWHAAZE00000001 - View
Malus domestica MD10G1267600 phytochrome E Chr10 + View
Malus domestica MD05G1291600 phytochrome E Chr05 + View
Manihot esculenta Manes.15G117200 Chromosome15 - View
Olea europaea Oeu021520.1 chr16 - View
Olea europaea Oeu046874.1 chr21 + View
Prunus persica Prupe.4G073900 Pp04 - View
Rosa chinensis RcHm_v2.0_Chr5g0012921 RcHm_v2.0_Chr5 - View
Sechium edule Sed0026665 LG01 - View
Solanum lycopersicum Solyc02g071260.3 Phytochrome (AHRD V3.3 *** A0A2G2XE21_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp7g15980 K12123 - phytochrome E (PHYE) ch7-4 + View
Solanum pennellii Sopen02g020320 Phytochrome E - Ipomoea nil (Japanese morning glory) (Pharbitis nil), member of Histidine Kinase | phytochrome E (PHYE) | FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity | INVOLVED IN: in 8 processes | LOCATED IN: membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Phytochrome, central region , Signal transduction histidine kinase, core , PAS fold , PAS , Phytochrome chromophore attachment domain , ATPase-like, ATP-binding domain , PAS fold-2 , Phytochrome A/B/C/D/E , Phytochrome , Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain , Phytochrome chromophore binding site , GAF | BEST Arabidopsis thaliana protein match is: phytochrome B Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400003072 Phytochrome E ST4.03ch02 + View
Trochodendron aralioides TAR624G1135 group9 + View
Theobroma cacao Thecc.06G157500 Phytochrome E Chromosome_6 + View
Tarenaya hassleriana THA.LOC104806113 phytochrome E NW_010962392.1 - View
Tripterygium wilfordii TWI53G1065 NC_052244.1 - View
Vitis vinifera GSVIVG01021381001 chr10 - View