Gene: CSS0039391

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0039391
  • Transcript Identifier CSS0039391.1
  • Gene Type Coding gene
  • Location Chr8 : 139941087-139944152 : negative

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0039391.1

Descriptions

  • Description Phytochrome E isoform 1 [Theobroma cacao]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009584
IEA
InterProdetection of visible light
GO:0007165
IEA
InterProsignal transduction
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0009903
ISO
PLAZA Integrative Orthologychloroplast avoidance movement Pp3c25_2610
GO:0009585
ISO
PLAZA Homology (enrichment)red, far-red light phototransduction HOM05D001060
GO:0017006
ISO
PLAZA Homology (enrichment)protein-tetrapyrrole linkage HOM05D001060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
IEA
InterProphosphorelay sensor kinase activity
GO:0005515
IEA
InterProprotein binding
GO:0042803
ISO
PLAZA Homology (enrichment)protein homodimerization activity HOM05D001060
GO:0009881
ISO
PLAZA Homology (enrichment)photoreceptor activity HOM05D001060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Pp3c25_2610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR000014 PAS domain
IPR001294 Phytochrome
IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR035965 PAS domain superfamily
IPR003018 GAF domain
IPR013515 Phytochrome, central region
IPR029016 GAF-like domain superfamily
IPR043150 Phytochrome, PHY domain
IPR013767 PAS fold
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)