Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0033277 hypothetical protein POPTR_0012s09440g [Populus trichocarpa] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G18710 LG-1 + View
Acer truncatum Atru.chr9.1008 chr9 - View
Actinidia chinensis Actinidia36787 Lachesis_group9 + View
Arabidopsis lyrata AL8G40370 scaffold_8 - View
Avicennia marina MSTRG.11294 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.15g095320 Heme chaperone HemW (Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917) AmaHy_arrow1_Scaffold_15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8LT8QW 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YD5AXN 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G63290 Radical SAM superfamily protein CPO3 (At5g63290) has not been characterized per se%2C but is a homolog of the CPDH/HEMN (see review by Layer et al%2C 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al%2C 2010)%2C but not yet from plants. Radical SAM superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C iron-sulfur cluster binding%2C coproporphyrinogen oxidase activity%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C porphyrin biosynthetic process%3B LOCATED IN: chloroplast%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638)%2C Putative oxygen-independent coproporphyrinogen III oxidase (InterPro:IPR004559)%2C HemN%2C C-terminal (InterPro:IPR010723)%2C Radical SAM (InterPro:IPR007197)%3B Has 10146 Blast hits to 10146 proteins in 2456 species: Archae - 113%3B Bacteria - 8401%3B Metazoa - 78%3B Fungi - 4%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 1513 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB04g19911 ChrB04 - View
Brassica napus A09p08200 A09 - View
Brassica oleracea BolC9t53839H C9 - View
Brassica rapa BraA09t36471Z A09 - View
Beta vulgaris EL10Ac7g18072 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT80G2173 NC_044372.1 + View
Cicer arietinum L. Ca_16091_v3 Ca_LG5_v3 + View
Coffea canephora Cc04_g10340 Putative Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 chr4 - View
Citrus clementina Ciclev10020014m.g scaffold_3 - View
Cardamine hirsuta CARHR277160 Oxygen-independent coproporphyrinogen III oxidase Chr8 - View
Carya illinoinensis CiPaw.11G012100 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Chr11 + View
Citrullus lanatus ClCG06G017630 Oxygen independent coproporphyrinogen III oxidase CG_Chr06 + View
Chenopodium quinoa AUR62001276 sll1917: Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62025730 sll1917: Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 C_Quinoa_Scaffold_1677 + View
Capsella rubella Carub.0008s2404 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase scaffold_8 - View
Cucumis sativus L. CsaV3_1G000810 Coproporphyrinogen III oxidase, oxygen-independent related protein chr1 - View
Davidia involucrata Dinv11106 GWHABJS00000006 - View
Durio zibethinus Duzib068G0092 NW_019167838.1 - View
Erigeron canadensis ECA246G2708 Conyza_canadensis_scaffold:8 - View
Erythranthe guttata Migut.I00467 scaffold_9 - View
Eutrema salsugineum Thhalv10004112m.g 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase scaffold_6 + View
Fragaria vesca FvH4_5g07331 K02495 - oxygen-independent coproporphyrinogen III oxidase (hemN, hemZ) Fvb5 - View
Gossypium hirsutum Gohir.D09G245800 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase D09 - View
Gossypium hirsutum Gohir.A09G244900 K02495 - oxygen-independent coproporphyrinogen III oxidase (hemN, hemZ) A09 - View
Glycine max Glyma.06G173067 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Gm06 + View
Glycine max Glyma.04G192800 K02495 - oxygen-independent coproporphyrinogen III oxidase (hemN, hemZ) Gm04 - View
Gossypium raimondii Gorai.006G270300 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0046F.1_g027560 Hma1.2p1_0046F.1 + View
Lupinus albus Lalb_Chr08g0236931 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Lalb_Chr08 - View
Lotus japonicus Lj1g0002208 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase chr1 + View
Lonicera japonica Lj5A100T59 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_13221 K02495 - oxygen-independent coproporphyrinogen III oxidase (hemN, hemZ) Lsat_1_v8_lg_5 + View
Malus domestica MD14G1163800 Radical SAM superfamily protein Chr14 + View
Malus domestica MD06G1152300 Radical SAM superfamily protein Chr06 + View
Manihot esculenta Manes.06G115100 Chromosome06 - View
Medicago truncatula Medtr3g075110 oxygen-independent coproporphyrinogen III oxidase, putative chr3 + View
Nelumbo nucifera Nn3g16581 chr3 + View
Prunus persica Prupe.5G157200 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Pp05 + View
Pisum sativum Psat5g141840 Radical SAM superfamily chr5LG3 - View
Populus trichocarpa Potri.012G092900 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Chr12 + View
Phaseolus vulgaris Phvul.009G169000 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Chr09 + View
Quercus lobata QL10p005246 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0191211 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim12G0172000 chr12 - View
Salix brachista Sabra12G0067500 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0000970 GWHAASQ00000004 + View
Solanum lycopersicum Solyc03g111360.3 Oxygen-independent coproporphyrinogen-III oxidase-like protein (AHRD V3.3 *** A0A2G3CCW7_CAPCH) SL4.0ch03 + View
Schrenkiella parvula Sp2g26410 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase ch2-4 - View
Solanum pennellii Sopen03g030490 Radical SAM superfamily protein | FUNCTIONS IN: oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity | INVOLVED IN: oxidation reduction, porphyrin biosynthetic process | LOCATED IN: chloroplast, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB , Putative oxygen-independent coproporphyrinogen III oxidase , HemN, C-terminal , Radical SAM Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400015239 Coproporphyrinigen III oxidase ST4.03ch03 + View
Selenicereus undatus Hund18538 Scaffold_33675 - View
Trochodendron aralioides TAR374G1424 group12 - View
Theobroma cacao Thecc.03G122600 Radical SAM superfamily protein Chromosome_3 - View
Tripterygium wilfordii TWI14G0972 NC_052249.1 - View
Vaccinium macrocarpon vmacro16659 Similar to hemW: Heme chaperone HemW (Synechocystis sp. (strain PCC 6803 / Kazusa) OX%3D1111708) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01007545001 chr17 - View