Gene: PGSC0003DMG400015239

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400015239
Transcript Identifier PGSC0003DMT400039404
Gene Type Coding gene
Location ST4.03ch03 : 51063111-51065218 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006543
#Genes/#Species 122/93
Phylogenetic origin

ID ORTHO05D008308
#Genes/#Species 121/93
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37463374
id PGSC0003DMG400015239.v4.03
uniprot M1B885

Descriptions

Short descriptions
Ortholog descriptions

Description Coproporphyrinigen III oxidase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006779	IBA IEA	GOA Database	porphyrin-containing compound biosynthetic process
GO:0006779	IEA	InterPro	porphyrin-containing compound biosynthetic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003824	IEA	GOA Database	catalytic activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0051536	IEA	GOA Database	iron-sulfur cluster binding
GO:0051536	IEA	InterPro	iron-sulfur cluster binding
GO:0004109	IEA	GOA Database	coproporphyrinogen oxidase activity
GO:0004109	IEA	InterPro	coproporphyrinogen oxidase activity
GO:0051539	IBA IEA	GOA Database	4 iron, 4 sulfur cluster binding
GO:0051539	IEA	InterPro	4 iron, 4 sulfur cluster binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IBA IEA	GOA Database	cytoplasm
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007197	Radical SAM
IPR004559	Heme chaperone HemW-like
IPR006638	Elp3/MiaB/NifB
IPR034505	Anaerobic coproporphyrinogen-III oxidase
IPR023404	Radical SAM, alpha/beta horseshoe

Mapman id	Description
7.12.4.2.2	Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.oxygen-independent coproporphyrinogen III oxidase (HemN)