Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G4610 LG-5 + View
Acer truncatum Atru.chr6.3264 chr6 - View
Acer truncatum Atru.chr10.2311 chr10 + View
Actinidia chinensis Actinidia10794 Lachesis_group15 + View
Arabidopsis lyrata AL4G28470 scaffold_4 + View
Aquilegia oxysepala Aqoxy1G02898 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NA6SJF K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V708II K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT2G32950 Transducin/WD40 repeat-like superfamily protein Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif%2C a coiled-coil domain%2C and several WD-40 repeats%2C similar to G-beta proteins. The C-terminus has homology to TAFII80%2C a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light. CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1)%3B Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30%3B Bacteria - 4454%3B Metazoa - 17716%3B Fungi - 8958%3B Plants - 5306%3B Viruses - 46%3B Other Eukaryotes - 5708 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC01g05875 ChrC01 + View
Brassica napus C04p16610 C04 - View
Beta vulgaris EL10Ac8g20146 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Chr8_EL10_PGA_scaffold4 - View
Beta vulgaris EL10Ac9g22825 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Chr9_EL10_PGA_scaffold8 + View
Cicer arietinum L. Ca_06056_v3 Ca_LG2_v3 + View
Corylus avellana Haze_06889 Similar to COP1: E3 ubiquitin-protein ligase COP1 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_12761 Similar to COP1: E3 ubiquitin-protein ligase COP1 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc05_g02740 E3 ubiquitin-protein ligase COP1 chr5 - View
Coffea canephora Cc09_g01080 E3 ubiquitin-protein ligase COP1 chr9 + View
Citrus clementina Ciclev10014775m.g scaffold_2 - View
Citrus clementina Ciclev10014491m.g scaffold_2 - View
Carpinus fangiana Cfa014312 Cfa06 + View
Cardamine hirsuta CARHR126880 Ubiquitin ligase protein cop1, putative Chr4 + View
Carya illinoinensis CiPaw.09G100000 PTHR22847//PTHR22847:SF422//PTHR22847:SF451 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Chr09 - View
Carya illinoinensis CiPaw.03G154600 PTHR22847//PTHR22847:SF451 - WD40 REPEAT PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Chr03 + View
Citrullus lanatus ClCG02G018100 Ubiquitin ligase protein cop1, putative CG_Chr02 + View
Carica papaya Cpa.g.sc152.61 supercontig_152 - View
Carica papaya Cpa.g.sc132.29 supercontig_132 - View
Chenopodium quinoa AUR62021890 COP1: E3 ubiquitin-protein ligase COP1 C_Quinoa_Scaffold_1862 + View
Chenopodium quinoa AUR62012768 COP1: E3 ubiquitin-protein ligase COP1 C_Quinoa_Scaffold_2715 - View
Chenopodium quinoa AUR62017583 COP1: E3 ubiquitin-protein ligase COP1 C_Quinoa_Scaffold_3458 + View
Chenopodium quinoa AUR62015122 COP1: E3 ubiquitin-protein ligase COP1 C_Quinoa_Scaffold_2888 + View
Capsella rubella Carub.0004s1438 PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 scaffold_4 + View
Cucumis sativus L. CsaV3_6G015450 E3 ubiquitin-protein ligase COP1 chr6 + View
Daucus carota DCAR_012918 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv08713 GWHABJS00000013 + View
Davidia involucrata Dinv39755 GWHABJS00000001 - View
Durio zibethinus Duzib138G1612 NW_019167893.1 + View
Erigeron canadensis ECA234G3468 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.K00737 Chr11 + View
Erythranthe guttata Migut.H01246 scaffold_8 - View
Erythranthe guttata Migut.M01361 scaffold_13 + View
Eutrema salsugineum Thhalv10016348m.g PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 scaffold_10 + View
Fragaria x ananassa FAN25G0152 KOG0272 - U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) Fvb3-1 - View
Gossypium hirsutum Gohir.A11G152500 PTHR22847//PTHR22847:SF451 - WD40 REPEAT PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 A11 + View
Gossypium hirsutum Gohir.D11G159400 PTHR22847//PTHR22847:SF422//PTHR22847:SF451 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 D11 + View
Gossypium hirsutum Gohir.D07G090375 D07 - View
Glycine max Glyma.02G267800 PTHR22847//PTHR22847:SF422//PTHR22847:SF451 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Gm02 + View
Glycine max Glyma.14G049700 PTHR22847//PTHR22847:SF451 - WD40 REPEAT PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Gm14 - View
Gossypium raimondii Gorai.007G170000 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0298F.1_g117350 Hma1.2p1_0298F.1 + View
Hydrangea macrophylla Hma1.2p1_0177F.1_g078120 Hma1.2p1_0177F.1 - View
Lupinus albus Lalb_Chr17g0347231 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Lalb_Chr17 + View
Lotus japonicus LjContig00029g0026581 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Contig00029 - View
Lonicera japonica Lj1A1237T46 GWHAAZE00000001 - View
Lonicera japonica Lj1C783G4 GWHAAZE00000001 - View
Malus domestica MD10G1328500 Transducin/WD40 repeat-like superfamily protein Chr10 - View
Manihot esculenta Manes.12G068900 Chromosome12 - View
Medicago truncatula Medtr5g085250 E3 ubiquitin-protein ligase COP1 chr5 + View
Nelumbo nucifera Nn1g03366 chr1 + View
Nelumbo nucifera Nn1g07310 chr1 - View
Punica granatum PGR142G3017 NC_045128.1 - View
Prunus persica Prupe.4G013500 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Pp04 + View
Papaver somniferum PSO675G4498 NC_039358.1 - View
Populus trichocarpa Potri.011G021700 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 Chr11 - View
Populus trichocarpa Potri.014G159300 PTHR22847//PTHR22847:SF451 - WD40 REPEAT PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Chr14 - View
Populus trichocarpa Potri.004G002700 PTHR22847//PTHR22847:SF422//PTHR22847:SF451 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 // E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Chr04 + View
Phaseolus vulgaris Phvul.008G214400 Chr08 - View
Quercus lobata QL05p070127 5 + View
Quercus lobata QL08p030433 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0001791 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim04G0049600 chr04 + View
Rhododendron simsii Rhsim13G0148700 chr13 + View
Salix brachista Sabra02G0171400 GWHAAZH00000002 + View
Salix brachista Sabra04G0001200 GWHAAZH00000004 + View
Salix brachista Sabra14G0121000 GWHAAZH00000014 - View
Simmondsia chinensis Sc05g0009500 GWHAASQ00000005 - View
Sechium edule Sed0004316 LG05 + View
Schrenkiella parvula Sp4g15310 PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 ch4-6 + View
Selenicereus undatus Hund23416 Scaffold_3410 + View
Trochodendron aralioides TAR629G2523 group0 + View
Theobroma cacao Thecc.06G230000 Transducin/WD40 repeat-like superfamily protein Chromosome_6 - View
Theobroma cacao Thecc.01G183000 Transducin/WD40 repeat-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104801011 E3 ubiquitin-protein ligase COP1 NW_010969548.1 - View
Tripterygium wilfordii TWI36G1526 NC_052237.1 - View
Tripterygium wilfordii TWI18G0734 NC_052241.1 + View
Vaccinium macrocarpon vmacro09368 Similar to COP1: E3 ubiquitin-protein ligase COP1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G2441 CM024073.1 + View
Vitis vinifera GSVIVG01030511001 chr12 - View