Gene: Potri.004G002700
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.004G002700
- Transcript Identifier Potri.004G002700.1
- Gene Type Coding gene
- Location Chr04 : 172068-176115 : positive
Gene Family Information
- ID HOM05D000684
- #Genes/#Species 835/100
- Phylogenetic origin
- ID ORTHO05D000688
- #Genes/#Species 673/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.004G002700.v4.1
- pacid 42794774
Descriptions
- Description PTHR22847//PTHR22847:SF422//PTHR22847:SF451 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 // E3 UBIQUITIN-PROTEIN LIGASE RFWD2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009640 | ISO | PLAZA Homology (enrichment) | photomorphogenesis | HOM05D000684 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR001841 | Zinc finger, RING-type |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR042755 | E3 ubiquitin-protein ligase COP1 |
| Mapman id | Description |
|---|---|
| 19.2.2.8.3.4.4.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.component COP1 |
| 26.1.1.3.1 | External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.component COP1 |