Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG10G12170 | LG-10 | + | View | |
Acer truncatum | Atru.chr1.1228 | chr1 | + | View | |
Actinidia chinensis | Actinidia39201 | Lachesis_group18 | + | View | |
Actinidia chinensis | Actinidia09301 | Lachesis_group5 | + | View | |
Arabidopsis lyrata | AL5G38840 | scaffold_5 | + | View | |
Avicennia marina | MSTRG.10809 | ScioBoG_13798_HRSCAF_13862 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.NU01L9 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | arahy.Tifrunner.gnm1.Arahy.06 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.JJI54I | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | arahy.Tifrunner.gnm1.Arahy.12 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.KD6P16 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | arahy.Tifrunner.gnm1.Arahy.16 | - | View |
Arabidopsis thaliana | AT3G57300 | DNA helicase INO80-like protein Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants%2C the HR frequency is reduced to 15%25 of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome. INO80 ortholog (INO80)%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C ATP binding%2C nucleic acid binding%3B INVOLVED IN: somatic cell DNA recombination%2C positive regulation of DNA repair%2C regulation of transcription%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA binding domain%2C INO80 (InterPro:IPR020838)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1)%3B Has 26461 Blast hits to 15529 proteins in 1767 species: Archae - 159%3B Bacteria - 7863%3B Metazoa - 5872%3B Fungi - 5586%3B Plants - 2348%3B Viruses - 196%3B Other Eukaryotes - 4437 (source: NCBI BLink). | Chr3 | + | View |
Amborella trichopoda | ATR0721G053 | AmTr_v1.0_scaffold00053 | + | View | |
Brassica napus | A09p50220 | A09 | + | View | |
Brassica oleracea | BolC8t50882H | C8 | + | View | |
Brassica rapa | BraA09t40472Z | A09 | + | View | |
Beta vulgaris | EL10Ac3g07138 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Chr3_EL10_PGA_scaffold7 | - | View |
Cicer arietinum L. | Ca_08427_v3 | Ca_LG3_v3 | + | View | |
Corylus avellana | Haze_19788 | Similar to INO80: Chromatin-remodeling ATPase INO80 (Arabidopsis thaliana OX%3D3702) | 10 | + | View |
Coffea canephora | Cc06_g18110 | DNA helicase INO80 | chr6 | - | View |
Citrus clementina | Ciclev10004142m.g | scaffold_9 | - | View | |
Carpinus fangiana | Cfa016778 | Cfa07 | + | View | |
Cardamine hirsuta | CARHR167500 | DNA helicase | Chr5 | + | View |
Carya illinoinensis | CiPaw.09G040400 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Chr09 | - | View |
Carya illinoinensis | CiPaw.10G035500 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Chr10 | - | View |
Citrullus lanatus | ClCG04G003710 | DNA helicase | CG_Chr04 | - | View |
Cucumis melo | MELO3C026332.2 | DNA helicase INO80-like protein | chr08 | + | View |
Carica papaya | Cpa.g.sc182.16 | supercontig_182 | - | View | |
Chenopodium quinoa | AUR62026097 | INO80: DNA helicase INO80 | C_Quinoa_Scaffold_3792 | - | View |
Chenopodium quinoa | AUR62024511 | INO80: DNA helicase INO80 | C_Quinoa_Scaffold_2876 | - | View |
Cucumis sativus L. | CsaV3_4G027520 | DNA helicase INO80-like | chr4 | - | View |
Davidia involucrata | Dinv18670 | GWHABJS00000021 | + | View | |
Davidia involucrata | Dinv39658 | GWHABJS00000015 | - | View | |
Durio zibethinus | Duzib106G2014 | NW_019168492.1 | + | View | |
Erigeron canadensis | ECA248G3812 | Conyza_canadensis_scaffold:9 | + | View | |
Eucalyptus grandis | Eucgr.A02310 | Chr01 | + | View | |
Erythranthe guttata | Migut.N02364 | scaffold_14 | + | View | |
Erythranthe guttata | Migut.K00102 | scaffold_11 | - | View | |
Eutrema salsugineum | Thhalv10005740m.g | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | scaffold_19 | - | View |
Fragaria x ananassa | FAN14G5411 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Fvb6-1 | - | View |
Fragaria x ananassa | FAN02G4202 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Fvb6-4 | + | View |
Fragaria x ananassa | FAN05G2243 | PTHR10799:SF722 - REGULATORY PROTEIN ZESTE | Fvb6-3 | - | View |
Fragaria x ananassa | FAN09G4422 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Fvb6-2 | - | View |
Fragaria vesca | FvH4_6g24570 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Fvb6 | + | View |
Gossypium hirsutum | Gohir.D09G117100 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | D09 | + | View |
Gossypium hirsutum | Gohir.A09G121000 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | A09 | + | View |
Glycine max | Glyma.19G136000 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Gm19 | + | View |
Glycine max | Glyma.10G106500 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Gm10 | + | View |
Glycine max | Glyma.03G133700 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Gm03 | + | View |
Gossypium raimondii | Gorai.006G135500 | Chr06 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0110F.1_g052850 | Hma1.2p1_0110F.1 | - | View | |
Lupinus albus | Lalb_Chr01g0017271 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Lalb_Chr01 | + | View |
Lupinus albus | Lalb_Chr25g0287091 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Lalb_Chr25 | + | View |
Lotus japonicus | Lj1g0026239 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | chr1 | - | View |
Lonicera japonica | Lj2A387T46 | GWHAAZE00000002 | - | View | |
Lonicera japonica | Lj1C1125T8 | GWHAAZE00000001 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_5_160760 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Lsat_1_v8_lg_5 | + | View |
Magnolia biondii | MBI13_g30332_MAGBIO | AED:0.11 | Chr13 | + | View |
Manihot esculenta | Manes.09G018100 | Chromosome09 | + | View | |
Medicago truncatula | Medtr7g090960 | DNA helicase INO80-like protein | chr7 | + | View |
Nelumbo nucifera | Nn2g15125 | chr2 | + | View | |
Nelumbo nucifera | Nn7g36404 | chr7 | - | View | |
Nicotiana tabacum | Nitab4.5_0000826g0080 | P-loop containing nucleoside triphosphate hydrolase, DBINO domain, SNF2-related, Helicase, C-terminal, Helicase, superfamily 1/2, ATP-binding domain | Nitab4.5_0000826 | - | View |
Nicotiana tabacum | Nitab4.5_0001618g0170 | Helicase, superfamily 1/2, ATP-binding domain, DBINO domain, SNF2-related, Helicase, C-terminal, P-loop containing nucleoside triphosphate hydrolase | Nitab4.5_0001618 | - | View |
Olea europaea | Oeu017927.1 | scaffold1753 | + | View | |
Petunia axillaris | Peaxi162Scf00130g00834 | DNA helicase INO80 | Peaxi162Scf00130 | - | View |
Punica granatum | PGR004G1210 | NC_045131.1 | - | View | |
Prunus persica | Prupe.7G053300 | Pp07 | + | View | |
Pisum sativum | Psat3g074520 | SNF2 family N-terminal domain | chr3LG5 | - | View |
Papaver somniferum | PSO384G1272 | NC_039368.1 | - | View | |
Populus trichocarpa | Potri.006G047100 | PTHR10799//PTHR10799:SF757 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // TRANSCRIPTIONAL COREPRESSOR SEUSS | Chr06 | - | View |
Populus trichocarpa | Potri.016G043500 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | Chr16 | - | View |
Phaseolus vulgaris | Phvul.001G129200 | Chr01 | + | View | |
Quercus lobata | QL07p003748 | 7 | - | View | |
Rhododendron simsii | Rhsim03G0029000 | chr03 | - | View | |
Striga asiatica | SGA_v2.0_scaffold94G28495 | scaffold94 | - | View | |
Salvia bowleyana | SalBow1G3151 | GWHASIU00000001 | - | View | |
Salix brachista | Sabra06G0032800 | GWHAAZH00000006 | - | View | |
Simmondsia chinensis | Sc19g0008530 | GWHAASQ00000019 | + | View | |
Sechium edule | Sed0002389 | LG14 | + | View | |
Sechium edule | Sed0023310 | LG03 | + | View | |
Solanum lycopersicum | Solyc04g016370.3 | DNA helicase INO80 (AHRD V3.3 *** A0A2G2ZF33_CAPAN) | SL4.0ch04 | - | View |
Schrenkiella parvula | Sp5g05300 | K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) | ch5-1 | - | View |
Solanum pennellii | Sopen04g008460 | Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome. | INO80 ortholog (INO80) | FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding | INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA binding domain, INO80 , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein ., Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice), SNF2-related | Spenn-ch04 | - | View |
Solanum tuberosum | PGSC0003DMG400012713 | Chromatin remodeling complex subunit | ST4.03ch04 | - | View |
Selenicereus undatus | Hund19132 | Scaffold_33673 | + | View | |
Trochodendron aralioides | TAR369G0997 | group18 | + | View | |
Trochodendron aralioides | TAR623G0750 | group7 | - | View | |
Theobroma cacao | Thecc.05G148000 | Chromatin remodeling complex subunit | Chromosome_5 | + | View |
Tarenaya hassleriana | THA.LOC104801997 | DNA helicase INO80 isoform X1 | NW_010960188.1 | + | View |
Trifolium pratense | TPR.G19660 | Tp57577_TGAC_v2_scaf_323 | - | View | |
Tripterygium wilfordii | TWI53G0966 | NC_052244.1 | + | View | |
Tripterygium wilfordii | TWI74G1174 | NC_052234.1 | - | View | |
Vaccinium macrocarpon | vmacro21967 | Similar to INO80: Chromatin-remodeling ATPase INO80 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1383G1381 | CM024070.1 | + | View | |
Vitis vinifera | GSVIVG01033231001 | chr8 | - | View |