Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0003254 PREDICTED: protein HIRA isoform X1 [Vitis vinifera] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.3302 chr3 + View
Arabidopsis lyrata AL5G22600 scaffold_5 + View
Arabidopsis thaliana AT3G44530 histone chaperone HIRA-like protein Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. It is a part of the HISTONE REGULATOR complex that deposits histones in a DNA synthesis-independent manner and affects both nucleosome occupancy and the maintenance of transcriptional silencing. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2. homolog of histone chaperone HIRA (HIRA)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C TUP1-like enhancer of split (InterPro:IPR011494)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G64630.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). homolog of histone chaperone HIRA (HIRA)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C TUP1-like enhancer of split (InterPro:IPR011494)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G64630.2). Chr3 + View
Brassica carinata BcaB01g01161 ChrB01 - View
Brassica napus C03p69110 C03 - View
Cannabis sativa CANSAT54G2221 NC_044375.1 - View
Cicer arietinum L. Ca_19387_v3 Ca_LG6_v3 - View
Corylus avellana Haze_23407 Similar to Os09g0567700: Protein HIRA (Oryza sativa subsp. japonica OX%3D39947) 6 + View
Coffea canephora Cc01_g09440 Protein HIRA chr1 + View
Citrus clementina Ciclev10027719m.g scaffold_8 + View
Ceratophyllum demersum CDE08G0670 6 + View
Carya illinoinensis CiPaw.14G101900 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Chr14 + View
Citrullus lanatus ClCG02G022110 Protein HIRA CG_Chr02 - View
Chenopodium quinoa AUR62009782 HIRA: Protein HIRA C_Quinoa_Scaffold_2493 + View
Cucumis sativus L. CsaV3_6G014950 Protein HIRA chr6 - View
Davidia involucrata Dinv29461 GWHABJS00000007 + View
Durio zibethinus Duzib170G0819 NW_019167871.1 + View
Eucalyptus grandis Eucgr.B03876 Chr02 + View
Fragaria x ananassa FAN16G3118 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Fvb3-3 - View
Fragaria x ananassa FAN21G1062 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Fvb3-2 - View
Fragaria x ananassa FAN25G0558 PTHR13831:SF0 - PROTEIN HIRA Fvb3-1 - View
Fragaria x ananassa FAN11G2495 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Fvb3-4 + View
Fragaria vesca FvH4_3g24580 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Fvb3 - View
Gossypium hirsutum Gohir.A05G082000 PTHR13831//PTHR13831:SF0 - MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS // PROTEIN HIRA A05 + View
Gossypium hirsutum Gohir.D05G084900 K11293 - protein HIRA/HIR1 (HIRA, HIR1) D05 + View
Gossypium hirsutum Gohir.A08G004600 K11293 - protein HIRA/HIR1 (HIRA, HIR1) A08 - View
Gossypium hirsutum Gohir.D08G014900 PTHR13831//PTHR13831:SF0 - MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS // PROTEIN HIRA D08 - View
Glycine max Glyma.12G183500 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Gm12 - View
Glycine max Glyma.13G317500 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Gm13 + View
Gossypium raimondii Gorai.009G086800 Chr09 + View
Gossypium raimondii Gorai.004G009300 Chr04 - View
Helianthus annuus HanXRQChr13g0397211 Probable protein HIRA HanXRQChr13 - View
Lupinus albus Lalb_Chr03g0028001 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Lalb_Chr03 - View
Lupinus albus Lalb_Chr01g0004811 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Lalb_Chr01 - View
Lotus japonicus Lj3g0014833 K11293 - protein HIRA/HIR1 (HIRA, HIR1) chr3 + View
Lonicera japonica Lj1A234G35 GWHAAZE00000001 + View
Lonicera japonica Lj2C981T10 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_40560 Lsat_1_v8_lg_6 + View
Manihot esculenta Manes.11G160250 Chromosome11 - View
Manihot esculenta Manes.04G005300 Chromosome04 + View
Medicago truncatula Medtr4g053675 histone transcription regulator HIRA protein chr4 + View
Olea europaea Oeu058251.1 scaffold775 + View
Punica granatum PGR102G2249 NC_045129.1 - View
Pisum sativum Psat5g256560 TUP1-like enhancer of split chr5LG3 - View
Papaver somniferum PSO384G0212 NC_039368.1 - View
Populus trichocarpa Potri.004G184900 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Chr04 + View
Populus trichocarpa Potri.009G144800 K11293 - protein HIRA/HIR1 (HIRA, HIR1) Chr09 + View
Phaseolus vulgaris Phvul.005G125300 Chr05 + View
Quercus lobata QL01p012653 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0044121 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0109800 chr13 - View
Striga asiatica SGA_v2.0_scaffold22G09887 scaffold22 + View
Salvia bowleyana SalBow6G4040 GWHASIU00000002 + View
Salix brachista Sabra09G0112300 GWHAAZH00000009 + View
Solanum lycopersicum Solyc11g067200.2 Protein HIRA (AHRD V3.3 *** A0A2G2VQ12_CAPBA) SL4.0ch11 - View
Solanum pennellii Sopen11g026900 Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2. | homolog of histone chaperone HIRA (HIRA) | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , TUP1-like enhancer of split , WD40 repeat, conserved site , WD40 repeat , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein ., WD40/YVTN repeat-like-containing domain, Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400007404 Protein HIRA ST4.03ch11 - View
Theobroma cacao Thecc.09G286400 Histone chaperone HIRA Chromosome_9 + View
Tripterygium wilfordii TWI79G1394 NC_052238.1 - View
Vigna mungo VMungo1080G0029 CM024079.1 - View
Vitis vinifera GSVIVG01036170001 chr6 - View