Gene: PGSC0003DMG400007404

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400007404
  • Transcript Identifier PGSC0003DMT400019122
  • Gene Type Coding gene
  • Location ST4.03ch11 : 40134647-40142735 : negative

Gene Family Information

  • ID HOM05D003901
  • #Genes/#Species 178/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37465077
  • id PGSC0003DMG400007404.v4.03
  • uniprot M1ABM4

Descriptions

  • Description Protein HIRA
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006334
ISO
PLAZA Integrative Orthologynucleosome assembly AT3G44530
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT3G44530
GO:0031935
ISO
PLAZA Integrative Orthologyregulation of chromatin silencing AT3G44530
GO:0006336
IBA
GOA DatabaseDNA replication-independent nucleosome assembly
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization
GO:0006325
IEA
InterProchromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031491
IBA
GOA Databasenucleosome binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030875
ISO
PLAZA Integrative OrthologyrDNA protrusion AT3G44530
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G44530
GO:0000417
IBA
GOA DatabaseHIR complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR031120 WD repeat HIR1
IPR011494 TUP1-like enhancer of split
Mapman id Description
12.2.3.1 Chromatin organisation.histone chaperone activities.HIRA histone chaperone complex.component HIRA