Gene: Lsat_1_v5_gn_6_40560

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_40560
  • Transcript Identifier Lsat_1_v5_gn_6_40560.2
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 53936375-53943434 : positive

Gene Family Information

  • ID HOM05D003901
  • #Genes/#Species 178/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_40560.v5
  • pacid 38941476

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006325
IEA
InterProchromatin organization
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0031935
ISO
PLAZA Integrative Orthologyregulation of chromatin silencing AT3G44530
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT3G44530
GO:0006334
ISO
PLAZA Integrative Orthologynucleosome assembly AT3G44530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G44530
GO:0030875
ISO
PLAZA Integrative OrthologyrDNA protrusion AT3G44530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR011494 TUP1-like enhancer of split
IPR031120 WD repeat HIR1
Mapman id Description
12.2.3.1 Chromatin organisation.histone chaperone activities.HIRA histone chaperone complex.component HIRA