Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G9530 | LG-4 | + | View | |
Aethionema arabicum | Aa31LG6G14890 | LG-6 | + | View | |
Aethionema arabicum | Aa31LG2G10860 | LG-2 | + | View | |
Acer truncatum | Atru.chr13.956 | chr13 | + | View | |
Acer truncatum | Atru.chr3.1201 | chr3 | + | View | |
Actinidia chinensis | Actinidia19255 | Lachesis_group28 | + | View | |
Actinidia chinensis | Actinidia25292 | Lachesis_group11 | + | View | |
Actinidia chinensis | Actinidia19614 | Lachesis_group27 | + | View | |
Amaranthus hybridus | Ah.05g171540 | Rhamnogalacturonate lyase (Rhamnogalacturonase) (EC 4.2.2.23) | AmaHy_arrow1_Scaffold_5 | - | View |
Aquilegia oxysepala | Aqoxy6G00661 | CHR06 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.BCG363 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.N9L63V | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | arahy.Tifrunner.gnm1.Arahy.17 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.6IG7E5 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | arahy.Tifrunner.gnm1.Arahy.05 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.8CY5CS | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | arahy.Tifrunner.gnm1.Arahy.07 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.XX92E1 | PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.4B7F2K | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | arahy.Tifrunner.gnm1.Arahy.15 | - | View |
Arabidopsis thaliana | AT2G22620 | Rhamnogalacturonate lyase family protein Rhamnogalacturonate lyase family protein%3B FUNCTIONS IN: lyase activity%3B INVOLVED IN: carbohydrate metabolic process%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013)%2C Rhamnogalacturonate lyase (InterPro:IPR010325)%2C Carbohydrate-binding-like fold (InterPro:IPR013784)%2C Galactose-binding domain-like (InterPro:IPR008979)%3B BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1)%3B Has 306 Blast hits to 289 proteins in 68 species: Archae - 0%3B Bacteria - 51%3B Metazoa - 0%3B Fungi - 87%3B Plants - 167%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). | Chr2 | - | View |
Arabidopsis thaliana | AT4G24430 | Rhamnogalacturonate lyase family protein Rhamnogalacturonate lyase family protein%3B FUNCTIONS IN: lyase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325)%2C Carbohydrate-binding-like fold (InterPro:IPR013784)%2C Galactose-binding domain-like (InterPro:IPR008979)%3B BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1)%3B Has 287 Blast hits to 273 proteins in 60 species: Archae - 0%3B Bacteria - 42%3B Metazoa - 0%3B Fungi - 83%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). | Chr4 | + | View |
Brassica oleracea | BolC1t01903H | C1 | + | View | |
Beta vulgaris | EL10Ac1g00476 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Chr1_EL10_PGA_scaffold3 | + | View |
Capsicum annuum | CAN.G723.1 | PGAv.1.6.scaffold723 | - | View | |
Cannabis sativa | CANSAT25G0466 | NC_044370.1 | + | View | |
Cannabis sativa | CANSAT01G2345 | NC_044373.1 | + | View | |
Cicer arietinum L. | Ca_05475_v3 | Ca_LG2_v3 | - | View | |
Cicer arietinum L. | Ca_15537_v3 | Ca_LG5_v3 | + | View | |
Corylus avellana | Haze_03913 | Protein of unknown function | 2 | - | View |
Corylus avellana | Haze_22492 | Similar to LKHA4: Leucine aminopeptidase (Arabidopsis thaliana OX%3D3702) | 3 | - | View |
Coffea canephora | Cc10_g08320 | Putative Rhamnogalacturonate lyase | chr10 | + | View |
Citrus clementina | Ciclev10003466m.g | scaffold_5 | + | View | |
Citrus clementina | Ciclev10025074m.g | scaffold_7 | + | View | |
Carpinus fangiana | Cfa006845 | Cfa02 | + | View | |
Carpinus fangiana | Cfa013818 | Cfa05 | - | View | |
Cardamine hirsuta | CARHR231820 | Rhamnogalacturonate lyase family protein | Chr7 | + | View |
Cardamine hirsuta | CARHR113840 | Rhamnogalacturonate lyase family protein | Chr4 | - | View |
Cardamine hirsuta | CARHR009910 | Rhamnogalacturonate lyase family protein | Chr1 | - | View |
Cardamine hirsuta | CARHR246370 | Rhamnogalacturonate lyase family protein | Chr7 | + | View |
Carya illinoinensis | CiPaw.08G057400 | PTHR32018:SF4 - LG27/30-LIKE GENE | Chr08 | - | View |
Carya illinoinensis | CiPaw.07G043700 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Chr07 | + | View |
Carya illinoinensis | CiPaw.07G162500 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | Chr07 | + | View |
Carya illinoinensis | CiPaw.08G143900 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Chr08 | - | View |
Citrullus lanatus | ClCG08G011530 | Rhamnogalacturonate lyase | CG_Chr08 | + | View |
Citrullus lanatus | ClCG11G014710 | Rhamnogalacturonate lyase | CG_Chr11 | - | View |
Citrullus lanatus | ClCG01G018240 | Rhamnogalacturonate lyase | CG_Chr01 | + | View |
Cucumis melo | MELO3C003505.2 | Rhamnogalacturonate lyase | chr04 | + | View |
Cucumis melo | MELO3C011070.2 | Rhamnogalacturonate lyase | chr03 | - | View |
Carica papaya | Cpa.g.sc177.18 | supercontig_177 | + | View | |
Carica papaya | Cpa.g.sc21.45 | supercontig_21 | - | View | |
Chenopodium quinoa | AUR62019114 | rhiE: Rhamnogalacturonate lyase | C_Quinoa_Scaffold_3876 | - | View |
Chenopodium quinoa | AUR62014371 | rhiE: Rhamnogalacturonate lyase | C_Quinoa_Scaffold_1566 | - | View |
Capsella rubella | Carub.0004s0178 | scaffold_4 | - | View | |
Capsella rubella | Carub.0007s1664 | PTHR32018:SF4 - LG27/30-LIKE GENE | scaffold_7 | - | View |
Cucumis sativus L. | CsaV3_2G030120 | Rhamnogalacturonate lyase family protein | chr2 | + | View |
Cucumis sativus L. | CsaV3_6G044820 | Rhamnogalacturonate lyase family protein | chr6 | + | View |
Cucumis sativus L. | CsaV3_3G048100 | Rhamnogalacturonate lyase family protein | chr3 | - | View |
Daucus carota | DCAR_020030 | hypothetical protein | DCARv2_Chr6 | + | View |
Davidia involucrata | Dinv44879 | GWHABJS00000002 | - | View | |
Davidia involucrata | Dinv36968 | GWHABJS00000021 | + | View | |
Durio zibethinus | Duzib093G0640 | NW_019167937.1 | - | View | |
Durio zibethinus | Duzib264G0400 | NW_019167960.1 | - | View | |
Durio zibethinus | Duzib147G0308 | NW_019168470.1 | - | View | |
Durio zibethinus | Duzib041G0503 | NW_019167826.1 | + | View | |
Durio zibethinus | Duzib116G0894 | NW_019167949.1 | + | View | |
Erigeron canadensis | ECA247G0577 | Conyza_canadensis_scaffold:7 | - | View | |
Eucalyptus grandis | Eucgr.F00442 | Chr06 | + | View | |
Erythranthe guttata | Migut.N02843 | scaffold_14 | + | View | |
Eutrema salsugineum | Thhalv10024647m.g | PTHR32018:SF4 - LG27/30-LIKE GENE | scaffold_1 | - | View |
Eutrema salsugineum | Thhalv10007058m.g | PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | scaffold_5 | + | View |
Fragaria x ananassa | FAN08G0535 | PTHR32018//PTHR32018:SF4 - FAMILY NOT NAMED // LG27/30-LIKE GENE | Fvb5-3 | - | View |
Fragaria x ananassa | FAN04G1774 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Fvb5-4 | + | View |
Fragaria x ananassa | FAN26G2220 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Fvb1-2 | + | View |
Fragaria x ananassa | FAN28G1677 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Fvb1-1 | + | View |
Fragaria x ananassa | FAN19G2835 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Fvb1-4 | + | View |
Fragaria x ananassa | FAN18G1709 | PTHR32018:SF4 - LG27/30-LIKE GENE | Fvb5-1 | + | View |
Fragaria vesca | FvH4_1g19194 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Fvb1 | + | View |
Fragaria vesca | FvH4_5g34110 | PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | Fvb5 | + | View |
Gossypium hirsutum | Gohir.D05G220666 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | D05 | + | View |
Gossypium hirsutum | Gohir.A06G030600 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | A06 | + | View |
Gossypium hirsutum | Gohir.D06G029900 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | D06 | + | View |
Gossypium hirsutum | Gohir.A05G216800 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | A05 | + | View |
Glycine max | Glyma.14G183400 | PF06045//PF14686 - Rhamnogalacturonate lyase family (Rhamnogal_lyase) // Polysaccharide lyase family 4, domain II (fn3_3) | Gm14 | - | View |
Glycine max | Glyma.02G216300 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Gm02 | - | View |
Glycine max | Glyma.04G091066 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | Gm04 | + | View |
Glycine max | Glyma.09G201300 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Gm09 | - | View |
Glycine max | Glyma.01G020800 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Gm01 | + | View |
Gossypium raimondii | Gorai.009G227700 | Chr09 | + | View | |
Gossypium raimondii | Gorai.002G138200 | Chr02 | + | View | |
Gossypium raimondii | Gorai.010G032900 | Chr10 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0010F.1_g006450 | Hma1.2p1_0010F.1 | + | View | |
Lupinus albus | Lalb_Chr17g0344641 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Lalb_Chr17 | - | View |
Lupinus albus | Lalb_Chr08g0242621 | PTHR32018//PTHR32018:SF1 - FAMILY NOT NAMED // F21M12.27 PROTEIN-RELATED | Lalb_Chr08 | - | View |
Lupinus albus | Lalb_Chr23g0269911 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | Lalb_Chr23 | + | View |
Lupinus albus | Lalb_Chr05g0216221 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Lalb_Chr05 | + | View |
Lupinus albus | Lalb_Chr09g0325841 | K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) | Lalb_Chr09 | + | View |
Lotus japonicus | Lj1g0013261 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | chr1 | + | View |
Lotus japonicus | LjContig00408g0010326 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Contig00408 | + | View |
Lotus japonicus | Lj2g0016894 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | chr2 | + | View |
Lonicera japonica | Lj4C741G4 | GWHAAZE00000004 | - | View | |
Lonicera japonica | Lj4C85G7 | GWHAAZE00000004 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_1_860 | Lsat_1_v8_lg_1 | + | View | |
Magnolia biondii | MBI16_g12304_MAGBIO | AED:0.39 | Chr16 | + | View |
Malus domestica | MD15G1389100 | Rhamnogalacturonate lyase family protein | Chr15 | - | View |
Malus domestica | MD01G1043200 | Rhamnogalacturonate lyase family protein | Chr01 | - | View |
Malus domestica | MD15G1308100 | Rhamnogalacturonate lyase family protein | Chr15 | + | View |
Malus domestica | MD08G1204400 | Rhamnogalacturonate lyase family protein | Chr08 | - | View |
Manihot esculenta | Manes.13G102600 | Chromosome13 | - | View | |
Manihot esculenta | Manes.05G188300 | Chromosome05 | + | View | |
Manihot esculenta | Manes.18G057400 | Chromosome18 | + | View | |
Medicago truncatula | Medtr5g066770 | rhamnogalacturonate lyase B-like protein | chr5 | - | View |
Medicago truncatula | Medtr5g031170 | rhamnogalacturonate lyase B-like protein | chr5 | + | View |
Nelumbo nucifera | Nn5g29810 | chr5 | + | View | |
Nelumbo nucifera | Nn1g05651 | chr1 | - | View | |
Nicotiana tabacum | Nitab4.5_0000354g0100 | Carboxypeptidase, regulatory domain, Galactose mutarotase-like domain, Rhamnogalacturonate lyase, Carbohydrate-binding-like fold, Galactose-binding domain-like | Nitab4.5_0000354 | + | View |
Petunia axillaris | Peaxi162Scf00160g00912 | Rhamnogalacturonate lyase family protein | Peaxi162Scf00160 | + | View |
Punica granatum | PGR042G2068 | NC_045130.1 | + | View | |
Prunus persica | Prupe.1G536600 | PTHR32018:SF4 - LG27/30-LIKE GENE | Pp01 | - | View |
Pisum sativum | Psat2g064400 | Rhamnogalacturonate lyase family | chr2LG1 | - | View |
Papaver somniferum | PSO541G5165 | NC_039363.1 | + | View | |
Populus trichocarpa | Potri.002G110000 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Chr02 | + | View |
Populus trichocarpa | Potri.005G151500 | PTHR32018//PTHR32018:SF8 - FAMILY NOT NAMED // RHAMNOGALACTURONATE LYASE-LIKE PROTEIN | Chr05 | + | View |
Phaseolus vulgaris | Phvul.002G144400 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Chr02 | + | View |
Phaseolus vulgaris | Phvul.008G183500 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | Chr08 | - | View |
Phaseolus vulgaris | Phvul.009G144700 | PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED | Chr09 | - | View |
Quercus lobata | QL09p018676 | 9 | - | View | |
Quercus lobata | QL12p039668 | 12 | - | View | |
Quercus lobata | QL06p037103 | 6 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0233611 | RcHm_v2.0_Chr7 | + | View | |
Rhododendron simsii | Rhsim06G0069900 | chr06 | + | View | |
Rhododendron simsii | Rhsim07G0213900 | chr07 | - | View | |
Salvia bowleyana | SalBow7G2642 | GWHASIU00000005 | + | View | |
Salvia bowleyana | SalBow2G1623 | GWHASIU00000007 | - | View | |
Salvia bowleyana | SalBow3G2650 | GWHASIU00000006 | + | View | |
Salix brachista | Sabra02G0086500 | GWHAAZH00000002 | + | View | |
Simmondsia chinensis | Sc26g0003010 | GWHAASQ00000026 | - | View | |
Sechium edule | Sed0006943 | LG13 | + | View | |
Sechium edule | Sed0020952 | LG10 | + | View | |
Sechium edule | Sed0006117 | LG05 | + | View | |
Solanum lycopersicum | Solyc04g076630.3 | Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) | SL4.0ch04 | - | View |
Solanum lycopersicum | Solyc12g088050.2 | Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) | SL4.0ch12 | - | View |
Schrenkiella parvula | Sp1g08510 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | ch1-1 | - | View |
Schrenkiella parvula | Sp7g22390 | PTHR32018//PTHR32018:SF4 - FAMILY NOT NAMED // LG27/30-LIKE GENE | ch7-4 | + | View |
Schrenkiella parvula | Sp4g01660 | 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B | ch4-1 | - | View |
Solanum pennellii | Sopen04g030360 | Rhamnogalacturonate lyase family protein | CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase , Carbohydrate-binding-like fold , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein | Spenn-ch04 | - | View |
Solanum pennellii | Sopen12g030080 | Rhamnogalacturonate lyase family protein | CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase , Carbohydrate-binding-like fold , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein | Spenn-ch12 | - | View |
Solanum tuberosum | PGSC0003DMG401002053 | Lyase | ST4.03ch12 | - | View |
Solanum tuberosum | PGSC0003DMG400009330 | Lyase | ST4.03ch04 | - | View |
Selenicereus undatus | Hund26829 | Scaffold_2055 | - | View | |
Trochodendron aralioides | TAR381G0763 | group11 | + | View | |
Theobroma cacao | Thecc.01G086400 | Rhamnogalacturonate lyase family protein | Chromosome_1 | + | View |
Theobroma cacao | Thecc.08G074200 | Rhamnogalacturonate lyase family protein | Chromosome_8 | - | View |
Trifolium pratense | TPR.G27027 | Tp57577_TGAC_v2_LG4 | + | View | |
Trifolium pratense | TPR.G12502 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI56G0251 | NC_052242.1 | + | View | |
Vaccinium macrocarpon | vmacro07681 | Similar to rhiE: Rhamnogalacturonate lyase (Dickeya dadantii (strain 3937) OX%3D198628) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro21361 | Similar to rhiE: Rhamnogalacturonate lyase (Dickeya dadantii (strain 3937) OX%3D198628) | chr10_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vaccinium macrocarpon | vmacro04627 | Similar to rglB: Probable rhamnogalacturonate lyase B (Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) OX%3D332952) | chr12_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0647G0033 | CM024073.1 | + | View | |
Vigna mungo | VMungo1215G2780 | CM024074.1 | + | View | |
Vitis vinifera | GSVIVG01009215001 | chr18 | - | View |