Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.2143 chr13 + View
Arabidopsis lyrata AL2G36980 scaffold_2 - View
Amaranthus hybridus Ah.05g167900 Sm-like protein LSM3B (AtLSM3B) (U6 snRNA-associated Sm-like protein LSM3B) AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy5G02098 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XJQY2Y K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9PQ1GY K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G76860 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1)%3B Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306%3B Bacteria - 0%3B Metazoa - 397%3B Fungi - 221%3B Plants - 178%3B Viruses - 0%3B Other Eukaryotes - 187 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G21190 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G76860.1)%3B Has 1267 Blast hits to 1267 proteins in 306 species: Archae - 319%3B Bacteria - 0%3B Metazoa - 370%3B Fungi - 215%3B Plants - 174%3B Viruses - 0%3B Other Eukaryotes - 189 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g26025 ChrC05 - View
Brassica carinata BcaC08g45508 ChrC08 + View
Brassica napus A07p28330 A07 + View
Brassica napus C06p31770 C06 + View
Brassica napus C05p19920 C05 - View
Brassica napus A06p17220 A06 - View
Brassica oleracea BolC6t40126H C6 - View
Brassica oleracea BolC5t30689H C5 - View
Brassica rapa BraA07t30470Z A07 + View
Beta vulgaris EL10Ac1g01537 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Chr1_EL10_PGA_scaffold3 - View
Cannabis sativa CANSAT25G0019 NC_044370.1 - View
Corylus avellana Haze_17748 Similar to LSM3A: Sm-like protein LSM3A (Arabidopsis thaliana OX%3D3702) 7 - View
Citrus clementina Ciclev10002950m.g scaffold_5 - View
Ceratophyllum demersum CDE08G0955 6 - View
Ceratophyllum demersum CDE06G1840 4 + View
Carpinus fangiana Cfa018326 Cfa07 + View
Carya illinoinensis CiPaw.16G013200 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Chr16 + View
Citrullus lanatus ClCG08G006960 U6 snRNA-associated Sm-like protein LSm3 CG_Chr08 - View
Cucumis melo MELO3C008344.2 Small nuclear ribonucleoprotein chr03 + View
Chenopodium quinoa AUR62013577 LSM3B: Sm-like protein LSM3B C_Quinoa_Scaffold_1611 - View
Chenopodium quinoa AUR62026713 LSM3B: Sm-like protein LSM3B C_Quinoa_Scaffold_2081 + View
Cucumis sativus L. CsaV3_6G005290 U6 snRNA-associated Sm-like protein LSm3 chr6 + View
Davidia involucrata Dinv09936 GWHABJS00000021 + View
Davidia involucrata Dinv25856 GWHABJS00000011 - View
Davidia involucrata Dinv41090 GWHABJS00000002 - View
Durio zibethinus Duzib093G0799 NW_019167937.1 - View
Durio zibethinus Duzib116G0179 NW_019167949.1 - View
Eucalyptus grandis Eucgr.F02710 Chr06 + View
Erythranthe guttata Migut.N03226 scaffold_14 - View
Eutrema salsugineum Thhalv10019321m.g K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) scaffold_9 + View
Fragaria x ananassa FAN27G2615 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Fvb2-1 + View
Fragaria x ananassa FAN15G1801 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Fvb2-4 + View
Fragaria x ananassa FAN24G0951 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Fvb2-2 - View
Fragaria x ananassa FAN20G2578 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Fvb2-3 - View
Fragaria vesca FvH4_2g13861 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Fvb2 + View
Gossypium hirsutum Gohir.A05G243000 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) A05 - View
Gossypium hirsutum Gohir.D05G244500 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) D05 - View
Glycine max Glyma.16G167900 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Gm16 + View
Glycine max Glyma.02G082300 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Gm02 + View
Gossypium raimondii Gorai.009G253600 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0105F.1_g050760 Hma1.2p1_0105F.1 + View
Lupinus albus Lalb_Chr03g0035271 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Lalb_Chr03 - View
Malus domestica MD05G1024000 Small nuclear ribonucleoprotein family protein Chr05 - View
Malus domestica MD10G1024500 Small nuclear ribonucleoprotein family protein Chr10 - View
Manihot esculenta Manes.02G178900 Chromosome02 - View
Manihot esculenta Manes.18G091400 Chromosome18 - View
Nelumbo nucifera Nn1g06097 chr1 + View
Nelumbo nucifera Nn5g28727 chr5 - View
Olea europaea Oeu011940.1 scaffold1461 - View
Punica granatum PGR042G0059 NC_045130.1 + View
Prunus persica Prupe.8G028400 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Pp08 - View
Populus trichocarpa Potri.002G068800 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Chr02 + View
Populus trichocarpa Potri.005G191600 K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) Chr05 - View
Rhododendron simsii Rhsim10G0141800 chr10 - View
Salvia bowleyana SalBow6G5104 GWHASIU00000002 - View
Salix brachista Sabra05G0146400 GWHAAZH00000005 - View
Salix brachista Sabra02G0054100 GWHAAZH00000002 + View
Sechium edule Sed0010346 LG03 - View
Sechium edule Sed0019016 LG11 - View
Solanum lycopersicum Solyc11g005370.2 U6 snRNA-associated Sm-like protein LSm3 (AHRD V3.3 *** A0A1U8F721_CAPAN) SL4.0ch11 - View
Selenicereus undatus Hund26698 Scaffold_2055 + View
Trochodendron aralioides TAR381G0202 group11 + View
Trochodendron aralioides TAR628G0743 group5 - View
Trochodendron aralioides TAR625G0830 group4 + View
Theobroma cacao Thecc.08G150600 Small nuclear ribonucleoprotein family protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104813712 sm-like protein LSM3B NW_010965373.1 + View
Tripterygium wilfordii TWI60G1706 NC_052246.1 + View
Vitis vinifera GSVIVG01034520001 chr18 + View