Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr6.1677 | chr6 | - | View | |
Actinidia chinensis | Actinidia03367 | Lachesis_group23 | + | View | |
Actinidia chinensis | Actinidia25971 | Lachesis_group22 | - | View | |
Avicennia marina | MSTRG.12164 | ScioBoG_17730_HRSCAF_17811 | + | View | |
Amaranthus hybridus | Ah.07g200540 | AmaHy_arrow1_Scaffold_7 | + | View | |
Aquilegia oxysepala | Aqoxy3G02321 | CHR03 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ECYT9B | KOG0131 - Splicing factor 3b, subunit 4 | arahy.Tifrunner.gnm1.Arahy.05 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.60H2PX | KOG0131 - Splicing factor 3b, subunit 4 | arahy.Tifrunner.gnm1.Arahy.15 | + | View |
Cannabis sativa | CANSAT21G2381 | NC_044374.1 | + | View | |
Corylus avellana | Haze_08213 | Similar to 28 kDa ribonucleoprotein, chloroplastic (Nicotiana sylvestris OX%3D4096) | 4 | - | View |
Coffea canephora | Cc08_g02910 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr8 | + | View |
Ceratophyllum demersum | CDE11G0422 | 9 | - | View | |
Carpinus fangiana | Cfa012454 | Cfa05 | + | View | |
Carya illinoinensis | CiPaw.12G064600 | KOG0131 - Splicing factor 3b, subunit 4 | Chr12 | + | View |
Carya illinoinensis | CiPaw.11G094600 | KOG0105//KOG0106//KOG0131//KOG0144//KOG4206 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B | Chr11 | + | View |
Citrullus lanatus | ClCG10G001490 | RNA-binding protein, putative | CG_Chr10 | - | View |
Cucumis melo | MELO3C013843.2 | 28 kDa ribonucleoprotein, chloroplastic | chr06 | - | View |
Chenopodium quinoa | AUR62018703 | CP31A: 31 kDa ribonucleoprotein, chloroplastic | C_Quinoa_Scaffold_1817 | - | View |
Chenopodium quinoa | AUR62007302 | CP33: RNA-binding protein CP33, chloroplastic | C_Quinoa_Scaffold_1971 | + | View |
Cucumis sativus L. | CsaV3_3G001570 | 28 kDa ribonucleoprotein, chloroplastic | chr3 | - | View |
Daucus carota | DCAR_008256 | hypothetical protein | DCARv2_Chr2 | - | View |
Daucus carota | DCAR_004294 | hypothetical protein | DCARv2_Chr1 | - | View |
Davidia involucrata | Dinv28967 | GWHABJS00000003 | + | View | |
Durio zibethinus | Duzib068G0998 | NW_019167838.1 | - | View | |
Erigeron canadensis | ECA233G6107 | Conyza_canadensis_scaffold:1 | - | View | |
Erigeron canadensis | ECA246G0701 | Conyza_canadensis_scaffold:8 | - | View | |
Eucalyptus grandis | Eucgr.D02207 | Chr04 | + | View | |
Fragaria x ananassa | FAN18G4534 | KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Fvb5-1 | + | View |
Fragaria x ananassa | FAN08G1774 | KOG0106//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) | Fvb5-3 | - | View |
Fragaria vesca | FvH4_5g22330 | KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Fvb5 | + | View |
Gossypium hirsutum | Gohir.D03G172600 | KOG0106//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) | D03 | + | View |
Gossypium hirsutum | Gohir.D11G029700 | K13126 - polyadenylate-binding protein (PABPC) | D11 | + | View |
Gossypium hirsutum | Gohir.A11G031000 | K13126 - polyadenylate-binding protein (PABPC) | A11 | + | View |
Glycine max | Glyma.09G205500 | KOG0105//KOG0106//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Gm09 | + | View |
Glycine max | Glyma.01G017400 | KOG0106//KOG0110//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) | Gm01 | - | View |
Gossypium raimondii | Gorai.009G264000 | Chr09 | + | View | |
Gossypium raimondii | Gorai.007G032500 | Chr07 | + | View | |
Helianthus annuus | HanXRQChr06g0167571 | Putative nucleotide-binding alpha-beta plait domain | HanXRQChr06 | + | View |
Hydrangea macrophylla | Hma1.2p1_0303F.1_g119000 | Hma1.2p1_0303F.1 | - | View | |
Lupinus albus | Lalb_Chr05g0215971 | KOG0106//KOG0110//KOG0131//KOG4210 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein | Lalb_Chr05 | - | View |
Lotus japonicus | Lj2g0016522 | KOG0106//KOG0110//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 | chr2 | - | View |
Lonicera japonica | Lj2C237G7 | GWHAAZE00000002 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_3_18460 | KOG0110 - RNA-binding protein (RRM superfamily) | Lsat_1_v8_lg_3 | + | View |
Lactuca sativa | Lsat_1_v5_gn_6_4121 | KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Lsat_1_v8_lg_6 | + | View |
Magnolia biondii | MBI04_g33879_MAGBIO | AED:0.04 | Chr04 | + | View |
Malus domestica | MD06G1035700 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr06 | + | View |
Nelumbo nucifera | Nn6g33572 | chr6 | - | View | |
Punica granatum | PGR031G1255 | NC_045127.1 | - | View | |
Prunus persica | Prupe.5G034000 | Pp05 | - | View | |
Pisum sativum | Psat2g137080 | RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) | chr2LG1 | + | View |
Papaver somniferum | PSO782G4960 | NC_039365.1 | + | View | |
Populus trichocarpa | Potri.001G141300 | KOG0106//KOG0110//KOG0131//KOG0144//KOG0145 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) | Chr01 | - | View |
Phaseolus vulgaris | Phvul.002G140400 | KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Chr02 | - | View |
Quercus lobata | QL12p004923 | 12 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0210041 | RcHm_v2.0_Chr7 | + | View | |
Rhododendron simsii | Rhsim11G0016500 | chr11 | + | View | |
Striga asiatica | SGA_v2.0_scaffold198G41093 | scaffold198 | - | View | |
Salix brachista | Sabra01G0109900 | GWHAAZH00000001 | - | View | |
Simmondsia chinensis | Sc01g0007390 | GWHAASQ00000001 | - | View | |
Sequoiadendron giganteum | SEGI_28070 | chr10 | - | View | |
Solanum lycopersicum | Solyc08g076840.3 | RNA-binding protein (AHRD V3.3 *** Q40270_MESCR) | SL4.0ch08 | - | View |
Solanum pennellii | Sopen08g025360 | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | LOCATED IN: thylakoid, chloroplast stroma, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein | Spenn-ch08 | - | View |
Solanum tuberosum | PGSC0003DMG400017519 | Ribonucleoprotein, chloroplast | ST4.03ch08 | - | View |
Selenicereus undatus | Hund11230 | Scaffold_10417 | - | View | |
Trochodendron aralioides | TAR375G0415 | group15 | - | View | |
Trochodendron aralioides | TAR374G1376 | group12 | - | View | |
Theobroma cacao | Thecc.03G225700 | RNA-binding family protein | Chromosome_3 | - | View |
Tripterygium wilfordii | TWI60G0791 | NC_052246.1 | - | View | |
Tripterygium wilfordii | TWI81G0579 | NC_052251.1 | + | View | |
Vaccinium macrocarpon | vmacro00322 | Similar to CP31A: 31 kDa ribonucleoprotein, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr1_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1215G2702 | CM024074.1 | - | View | |
Vitis vinifera | GSVIVG01013146001 | chr2 | + | View |