Gene: CiPaw.11G094600

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.11G094600
  • Transcript Identifier CiPaw.11G094600.1
  • Gene Type Coding gene
  • Location Chr11 : 30273897-30278608 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.11G094600.v1.1
  • pacid 45839306
  • locus Caril.11G092300

Descriptions

  • Description KOG0105//KOG0106//KOG0131//KOG0144//KOG4206 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G35410

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G35410
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G35410
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT2G35410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.11.2.4 RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP33b)