Gene: Glyma.01G017400

General Information

Structural Information

Species Glycine max
Gene Identifier Glyma.01G017400
Transcript Identifier Glyma.01G017400.1
Gene Type Coding gene
Location Gm01 : 1656367-1659464 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000142
#Genes/#Species 2580/100
Phylogenetic origin

ID ORTHO05D003173
#Genes/#Species 239/91
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Glyma.01G017400.Wm82.a4.v1
pacid 41117786
synonym Glyma01g02150

Descriptions

Short descriptions
Ortholog descriptions

Description KOG0106//KOG0110//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G35410

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT2G35410
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT2G35410
GO:0009579	ISO	PLAZA Integrative Orthology	thylakoid	AT2G35410

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.11.2.4	RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP33b)