Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG3G17220 | LG-3 | + | View | |
| Acer truncatum | Atru.chr4.692 | chr4 | - | View | |
| Actinidia chinensis | Actinidia28437 | Lachesis_group16 | - | View | |
| Actinidia chinensis | Actinidia09839 | Lachesis_group11 | - | View | |
| Arabidopsis lyrata | AL6G20320 | scaffold_6 | - | View | |
| Arabidopsis lyrata | AL8G42220 | scaffold_8 | - | View | |
| Avicennia marina | MSTRG.23295 | ScioBoG_3895_HRSCAF_3912 | - | View | |
| Avicennia marina | MSTRG.2518 | ScioBoG_102835_HRSCAF_103059 | - | View | |
| Aquilegia oxysepala | Aqoxy6G00403 | CHR06 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R73VTB | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | arahy.Tifrunner.gnm1.Arahy.10 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ZE2GKX | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.6XFQ3U | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | arahy.Tifrunner.gnm1.Arahy.20 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.GJ501R | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
| Arabidopsis thaliana | AT5G09900 | 26S proteasome regulatory subunit, putative (RPN5) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects. EMBRYO DEFECTIVE 2107 (EMB2107)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Proteasome component (PCI) domain (InterPro:IPR000717)%3B BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2)%3B Has 836 Blast hits to 828 proteins in 231 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 300%3B Fungi - 280%3B Plants - 112%3B Viruses - 0%3B Other Eukaryotes - 138 (source: NCBI BLink). | Chr5 | - | View |
| Arabidopsis thaliana | AT5G64760 | regulatory particle non-ATPase subunit 5B Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a. regulatory particle non-ATPase subunit 5B (RPN5B)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Proteasome component (PCI) domain (InterPro:IPR000717)%3B BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit%2C putative (RPN5) (TAIR:AT5G09900.1)%3B Has 840 Blast hits to 830 proteins in 229 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 302%3B Fungi - 291%3B Plants - 115%3B Viruses - 0%3B Other Eukaryotes - 132 (source: NCBI BLink). | Chr5 | - | View |
| Brassica carinata | BcaB08g37173 | ChrB08 | + | View | |
| Brassica napus | C09p67640 | C09 | + | View | |
| Brassica napus | A10p27570 | A10 | + | View | |
| Brassica oleracea | BolC9t59526H | C9 | + | View | |
| Brassica rapa | BraA10t44809Z | A10 | + | View | |
| Cannabis sativa | CANSAT01G1300 | NC_044373.1 | + | View | |
| Cicer arietinum L. | Ca_17672_v3 | Ca_LG6_v3 | - | View | |
| Corylus avellana | Haze_25086 | Similar to RPN5A: 26S proteasome non-ATPase regulatory subunit 12 homolog A (Arabidopsis thaliana OX%3D3702) | 8 | + | View |
| Coffea canephora | Cc07_g16710 | Putative 26S proteasome non-ATPase regulatory subunit 12 | chr7 | + | View |
| Citrus clementina | Ciclev10025611m.g | scaffold_7 | + | View | |
| Cardamine hirsuta | CARHR203440 | 26S proteasome regulatory subunit N5 | Chr6 | + | View |
| Cardamine hirsuta | CARHR278750 | 26S proteasome regulatory subunit N5 | Chr8 | - | View |
| Carya illinoinensis | CiPaw.04G088700 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Chr04 | - | View |
| Carya illinoinensis | CiPaw.03G131400 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Chr03 | - | View |
| Carica papaya | Cpa.g.sc72.48 | supercontig_72 | - | View | |
| Capsella rubella | Carub.0006s0834 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | scaffold_6 | - | View |
| Capsella rubella | Carub.0008s2557 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | scaffold_8 | - | View |
| Daucus carota | DCAR_001393 | hypothetical protein | DCARv2_Chr1 | - | View |
| Davidia involucrata | Dinv19452 | GWHABJS00000014 | + | View | |
| Davidia involucrata | Dinv04462 | GWHABJS00000021 | + | View | |
| Erythranthe guttata | Migut.L00054 | scaffold_12 | - | View | |
| Erythranthe guttata | Migut.H02459 | scaffold_8 | + | View | |
| Eutrema salsugineum | Thhalv10013557m.g | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | scaffold_2 | - | View |
| Eutrema salsugineum | Thhalv10004227m.g | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | scaffold_6 | + | View |
| Fragaria x ananassa | FAN28G2374 | KOG1498 - 26S proteasome regulatory complex, subunit RPN5/PSMD12 | Fvb1-1 | - | View |
| Fragaria x ananassa | FAN19G2345 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Fvb1-4 | + | View |
| Fragaria x ananassa | FAN26G1501 | KOG1498 - 26S proteasome regulatory complex, subunit RPN5/PSMD12 | Fvb1-2 | + | View |
| Fragaria x ananassa | FAN23G1006 | PTHR10855:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12 | Fvb1-3 | + | View |
| Fragaria vesca | FvH4_1g23340 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Fvb1 | + | View |
| Glycine max | Glyma.04G217500 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Gm04 | - | View |
| Glycine max | Glyma.06G148300 | KOG1498 - 26S proteasome regulatory complex, subunit RPN5/PSMD12 | Gm06 | + | View |
| Glycine max | Glyma.08G145200 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Gm08 | + | View |
| Glycine max | Glyma.05G186600 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Gm05 | + | View |
| Lupinus albus | Lalb_Chr07g0184681 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Lalb_Chr07 | - | View |
| Lupinus albus | Lalb_Chr13g0296321 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Lalb_Chr13 | + | View |
| Lotus japonicus | Lj4g0024278 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | chr4 | - | View |
| Lonicera japonica | Lj4A859T54 | GWHAAZE00000004 | - | View | |
| Lonicera japonica | Lj2A569G64 | GWHAAZE00000002 | + | View | |
| Manihot esculenta | Manes.13G081000 | Chromosome13 | + | View | |
| Manihot esculenta | Manes.12G145900 | Chromosome12 | + | View | |
| Medicago truncatula | Medtr8g092390 | 26S proteasome regulatory subunit N5 | chr8 | + | View |
| Nelumbo nucifera | Nn1g06030 | chr1 | + | View | |
| Olea europaea | Oeu028349.2 | chr18 | + | View | |
| Petunia axillaris | Peaxi162Scf00025g10312 | 26S proteasome non-ATPase regulatory subunit 12 homolog A | Peaxi162Scf00025 | - | View |
| Punica granatum | PGR119G0924 | NC_045132.1 | - | View | |
| Pisum sativum | Psat7g049320 | PCI domain | chr7LG7 | - | View |
| Populus trichocarpa | Potri.007G076900 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Chr07 | - | View |
| Populus trichocarpa | Potri.005G087100 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Chr05 | + | View |
| Phaseolus vulgaris | Phvul.002G267700 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | Chr02 | + | View |
| Phaseolus vulgaris | Phvul.009G138000 | Chr09 | - | View | |
| Quercus lobata | QL06p031307 | 6 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr2g0118191 | RcHm_v2.0_Chr2 | + | View | |
| Rhododendron simsii | Rhsim10G0145000 | chr10 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold2G01264 | scaffold2 | - | View | |
| Salvia bowleyana | SalBow5G0567 | GWHASIU00000003 | - | View | |
| Salvia bowleyana | SalBow6G6156 | GWHASIU00000002 | + | View | |
| Salix brachista | Sabra05G0071900 | GWHAAZH00000005 | + | View | |
| Salix brachista | Sabra07G0064800 | GWHAAZH00000007 | - | View | |
| Solanum lycopersicum | Solyc04g051370.4 | 26S proteasome non-ATPase regulatory subunit 12-like protein (AHRD V3.3 *** A0A2K3MWS1_TRIPR) | SL4.0ch04 | - | View |
| Schrenkiella parvula | Sp6g33510 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | ch6-6 | + | View |
| Schrenkiella parvula | Sp2g27830 | K03035 - 26S proteasome regulatory subunit N5 (PSMD12, RPN5) | ch2-4 | - | View |
| Solanum pennellii | Sopen04g022780 | Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects. | EMBRYO DEFECTIVE 2107 (EMB2107) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy | LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B | Spenn-ch04 | - | View |
| Solanum tuberosum | PGSC0003DMG400019701 | 26S proteasome subunit RPN5b | ST4.03ch04 | + | View |
| Trochodendron aralioides | TAR625G1099 | group4 | - | View | |
| Trochodendron aralioides | TAR628G0368 | group5 | - | View | |
| Tarenaya hassleriana | THA.LOC104799360 | 26S proteasome non-ATPase regulatory subunit 12 homolog A | NW_010960188.1 | + | View |
| Trifolium pratense | TPR.G2195 | Tp57577_TGAC_v2_LG3 | - | View | |
| Tripterygium wilfordii | TWI79G1157 | NC_052238.1 | - | View | |
| Tripterygium wilfordii | TWI31G0616 | NC_052233.1 | - | View | |
| Vigna mungo | VMungo1309G1478 | CM024072.1 | + | View | |
| Vigna mungo | VMungo0251G0756 | CM024069.1 | + | View | |
| Vitis vinifera | GSVIVG01022276001 | chr7 | + | View |