Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0025328 PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Nelumbo nucifera] Chr1 - View
CSS0006177 PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Nelumbo nucifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G5420 LG-2 - View
Aethionema arabicum Aa31LG9G970 LG-9 - View
Acer truncatum Atru.chr6.2471 chr6 + View
Actinidia chinensis Actinidia36151 Lachesis_group4 - View
Actinidia chinensis Actinidia05951 Lachesis_group11 - View
Arabidopsis lyrata AL7G49090 scaffold_7 - View
Arabidopsis lyrata AL5G16710 scaffold_5 - View
Avicennia marina MSTRG.15548 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.3273 ScioBoG_102836_HRSCAF_103072 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EL261C K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G27380 succinate dehydrogenase 2-1 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex%2C a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. succinate dehydrogenase 2-1 (SDH2-1)%3B FUNCTIONS IN: electron carrier activity%2C zinc ion binding%2C succinate dehydrogenase activity%3B INVOLVED IN: mitochondrial electron transport%2C succinate to ubiquinone%3B LOCATED IN: mitochondrion%2C succinate dehydrogenase complex%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%2C Fumarate reductase%2C C-terminal (InterPro:IPR012285)%2C 2Fe-2S ferredoxin%2C iron-sulphur binding site (InterPro:IPR006058)%2C 4Fe-4S ferredoxin%2C iron-sulpur binding domain (InterPro:IPR017896)%2C 4Fe-4S ferredoxin%2C iron-sulphur binding%2C conserved site (InterPro:IPR017900)%2C Alpha-helical ferredoxin (InterPro:IPR009051)%2C Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489)%3B BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1)%3B Has 8769 Blast hits to 8765 proteins in 2181 species: Archae - 169%3B Bacteria - 5122%3B Metazoa - 266%3B Fungi - 168%3B Plants - 144%3B Viruses - 0%3B Other Eukaryotes - 2900 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G40650 succinate dehydrogenase 2-2 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex%2C a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. succinate dehydrogenase 2-2 (SDH2-2)%3B CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%2C Fumarate reductase%2C C-terminal (InterPro:IPR012285)%2C 2Fe-2S ferredoxin%2C iron-sulphur binding site (InterPro:IPR006058)%2C 4Fe-4S ferredoxin%2C iron-sulpur binding domain (InterPro:IPR017896)%2C 4Fe-4S ferredoxin%2C iron-sulphur binding%2C conserved site (InterPro:IPR017900)%2C Alpha-helical ferredoxin (InterPro:IPR009051)%2C Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489)%3B BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 (TAIR:AT3G27380.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g33825 ChrC06 + View
Brassica carinata BcaB04g19435 ChrB04 - View
Brassica carinata BcaB07g30165 ChrB07 + View
Brassica carinata BcaC08g44473 ChrC08 - View
Brassica napus C09p03600 C09 - View
Brassica napus A09p03380 A09 - View
Brassica napus A07p20420 A07 + View
Brassica napus C02p54130 C02 - View
Brassica napus C06p19310 C06 + View
Brassica napus A02p35420 A02 - View
Brassica oleracea BolC6t37125H C6 + View
Brassica oleracea BolC7t44162H C7 - View
Brassica oleracea BolC2t11476H C2 - View
Brassica oleracea BolC9t53279H C9 - View
Brassica rapa BraA02t08543Z A02 - View
Capsicum annuum CAN.G473.47 PGAv.1.6.scaffold473 + View
Cannabis sativa CANSAT64G2483 NC_044379.1 - View
Corylus avellana Haze_14794 Similar to SDH2-2: Succinate dehydrogenase iron-sulfur subunit 2, mitochondrial (Arabidopsis thaliana OX%3D3702) 5 - View
Citrus clementina Ciclev10016181m.g scaffold_2 - View
Cardamine hirsuta CARHR148700 Succinate dehydrogenase iron sulfur subunit B Chr5 - View
Cardamine hirsuta CARHR261300 Succinate dehydrogenase iron sulfur subunit B Chr8 - View
Carya illinoinensis CiPaw.04G032100 1.3.5.1//1.3.99.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase // Deleted entry Chr04 + View
Carya illinoinensis CiPaw.03G048800 PTHR11921//PTHR11921:SF29 - SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN // SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL Chr03 + View
Citrullus lanatus ClCG05G013010 Succinate dehydrogenase iron-sulfur protein subunit CG_Chr05 - View
Cucumis melo MELO3C014824.2 Succinate dehydrogenase iron-sulfur subunit, mitochondrial Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial chr06 + View
Carica papaya Cpa.g.sc130.56 supercontig_130 - View
Capsella rubella Carub.0007s3483 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) scaffold_7 - View
Capsella rubella Carub.0005s0569 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) scaffold_5 - View
Daucus carota DCAR_021751 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_011283 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv25705 GWHABJS00000012 + View
Durio zibethinus Duzib147G0730 NW_019168470.1 + View
Durio zibethinus Duzib264G0940 NW_019167960.1 - View
Erigeron canadensis ECA246G3649 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G0113 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.H00043 scaffold_8 + View
Erythranthe guttata Migut.K01430 scaffold_11 + View
Eutrema salsugineum Thhalv10004747m.g K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) scaffold_6 + View
Eutrema salsugineum Thhalv10027879m.g K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) scaffold_14 - View
Fragaria x ananassa FAN09G0242 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Fvb6-2 + View
Fragaria x ananassa FAN02G1702 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Fvb6-4 + View
Fragaria x ananassa FAN14G0722 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Fvb6-1 - View
Fragaria x ananassa FAN05G0765 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Fvb6-3 - View
Fragaria vesca FvH4_6g52280 PTHR11921//PTHR11921:SF29 - SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN // SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL Fvb6 + View
Gossypium hirsutum Gohir.A07G225100 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) A07 + View
Gossypium hirsutum Gohir.D04G080480 1.3.99.1 - Deleted entry D04 - View
Gossypium hirsutum Gohir.D07G232300 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) D07 + View
Gossypium hirsutum Gohir.A05G342500 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) A05 - View
Glycine max Glyma.16G066200 1.3.5.1//1.3.99.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase // Deleted entry Gm16 - View
Glycine max Glyma.19G080600 1.3.5.1//1.3.99.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase // Deleted entry Gm19 + View
Gossypium raimondii Gorai.001G267500 Chr01 + View
Helianthus annuus HanXRQChr15g0487121 Probable succinate dehydrogenase 2-2 HanXRQChr15 + View
Lotus japonicus Lj1g0000985 1.3.99.1 - Deleted entry chr1 + View
Lonicera japonica Lj7C604T11 GWHAAZE00000007 + View
Lonicera japonica Lju41C45G5 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_4_184781 1.3.99.1 - Deleted entry Lsat_1_v8_lg_4 - View
Malus domestica MD09G1019100 succinate dehydrogenase 2-2 Chr09 - View
Malus domestica MD17G1019700 succinate dehydrogenase 2-2 Chr17 - View
Manihot esculenta Manes.15G154900 Chromosome15 + View
Manihot esculenta Manes.17G108500 Chromosome17 - View
Nicotiana tabacum Nitab4.5_0001031g0210 Zinc finger, GRF-type, Alpha-helical ferredoxin Nitab4.5_0001031 - View
Nicotiana tabacum Nitab4.5_0000935g0060 2Fe-2S ferredoxin-type domain, Succinate dehydogenase/fumarate reductase N-terminal, Succinate dehydrogenase/fumarate reductase iron-sulphur protein, 2Fe-2S ferredoxin, iron-sulphur binding site, 4Fe-4S ferredoxin-type, iron-sulpur binding domain, Beta-grasp domain, Alpha-helical ferredoxin, 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Nitab4.5_0000935 - View
Olea europaea Oeu062396.1 scaffold903 + View
Olea europaea Oeu013961.2 chr11 - View
Olea europaea Oeu050444.4 scaffold567 - View
Petunia axillaris Peaxi162Scf00420g00234 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial Peaxi162Scf00420 + View
Punica granatum PGR142G3931 NC_045128.1 + View
Prunus persica Prupe.3G297900 Pp03 + View
Populus trichocarpa Potri.001G338400 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Chr01 - View
Quercus lobata QL02p073340 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0173811 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0046700 chr08 - View
Striga asiatica SGA_v2.0_scaffold47G17534 scaffold47 + View
Striga asiatica SGA_v2.0_scaffold154G37142 scaffold154 + View
Salvia bowleyana SalBow7G1758 GWHASIU00000005 + View
Salix brachista Sabra16G0219100 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0007140 GWHAASQ00000003 - View
Sechium edule Sed0010707 LG06 + View
Sechium edule Sed0001228 LG08 - View
Solanum lycopersicum Solyc02g093680.3 succinate dehydrogenase SL4.0ch02 + View
Schrenkiella parvula Sp2g16570 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) ch2-4 - View
Schrenkiella parvula Sp7g01210 K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) ch7-1 - View
Solanum pennellii Sopen02g038310 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. | succinate dehydrogenase 2-2 (SDH2-2) | CONTAINS InterPro DOMAIN/s: Ferredoxin , Beta-grasp fold, ferredoxin-type , Fumarate reductase, C-terminal , 2Fe-2S ferredoxin, iron-sulphur binding site , 4Fe-4S ferredoxin, iron-sulpur binding domain , 4Fe-4S ferredoxin, iron-sulphur binding, conserved site , Alpha-helical ferredoxin , Succinate dehydrogenase/fumarate reductase iron-sulphur protein | BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400012624 Mitochondrial succinate dehydrogenase iron sulfur subunit ST4.03ch02 + View
Trochodendron aralioides TAR629G1595 group0 - View
Theobroma cacao Thecc.04G026800 Succinate dehydrogenase 2-2 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104805354 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2%2C mitochondrial NW_010961290.1 - View
Tarenaya hassleriana THA.LOC104824570 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2%2C mitochondrial isoform X1 NW_010966881.1 + View
Trifolium pratense TPR.G1082 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI36G1614 NC_052237.1 + View
Tripterygium wilfordii TWI56G0318 NC_052242.1 + View
Vaccinium macrocarpon vmacro18308 Similar to SDH2-2: Succinate dehydrogenase iron-sulfur subunit 2, mitochondrial (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01003975001 chr14 - View