Gene: AT3G27380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G27380
  • Transcript Identifier AT3G27380.1
  • Gene Type Coding gene
  • Location Chr3 : 10131209-10132673 : negative

Gene Family Information

  • ID HOM05D002252
  • #Genes/#Species 299/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G27380.1
  • symbol SDH2-1
  • uniprot Q8LBZ7

Descriptions

  • Description succinate dehydrogenase 2-1
  • Computational description succinate dehydrogenase 2-1 (SDH2-1); FUNCTIONS IN: electron carrier activity, zinc ion binding, succinate dehydrogenase activity; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrion, succinate dehydrogenase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 8769 Blast hits to 8765 proteins in 2181 species: Archae - 169; Bacteria - 5122; Metazoa - 266; Fungi - 168; Plants - 144; Viruses - 0; Other Eukaryotes - 2900 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IEA
Gene Ontologytricarboxylic acid cycle
GO:0006099
IEA
InterProtricarboxylic acid cycle
GO:0009060
IBA
Gene Ontologyaerobic respiration1
GO:0022904
IBA
Gene Ontologyrespiratory electron transport chain1
GO:0006121
ISS
Gene Ontologymitochondrial electron transport, succinate to ubiquinone2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0009055
IEA
GOA Databaseelectron transfer activity
GO:0009055
ISS
Gene Ontologyelectron transfer activity2
GO:0009055
IEA
InterProelectron transfer activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051537
IEA
GOA Database2 iron, 2 sulfur cluster binding
GO:0051538
IEA
GOA Database3 iron, 4 sulfur cluster binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0008270
IDA
GOA Databasezinc ion binding
GO:0008270
HDA
Gene Ontologyzinc ion binding3
GO:0000104
ISS
Gene Ontologysuccinate dehydrogenase activity2
GO:0008177
IEA
Gene Ontologysuccinate dehydrogenase (ubiquinone) activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
ISM, IBA
Gene Ontologymitochondrion1 2 4
GO:0005829
HDA
Gene Ontologycytosol5
GO:0045273
IDA
Gene Ontologyrespiratory chain complex II6
GO:0045281
ISS
Gene Ontologysuccinate dehydrogenase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009051 Alpha-helical ferredoxin
IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR025192 Succinate dehydogenase/fumarate reductase N-terminal
IPR012675 Beta-grasp domain superfamily
IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein
IPR036010 2Fe-2S ferredoxin-like superfamily
Mapman id Description
2.3.6.1.2 Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.iron-sulphur component SDH2