Gene: Carub.0007s3483
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s3483
- Transcript Identifier Carub.0007s3483.1
- Gene Type Coding gene
- Location scaffold_7 : 15895553-15897065 : negative
Gene Family Information
- ID HOM05D002252
- #Genes/#Species 299/98
- Phylogenetic origin
- ID ORTHO05D002451
- #Genes/#Species 286/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0007s3483.v1.1
- pacid 39233079
- synonym Carubv10005447m.g
Descriptions
- Description K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006099 | IEA | InterPro | tricarboxylic acid cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0009055 | IEA | InterPro | electron transfer activity | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT5G40650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045273 | ISO | PLAZA Integrative Orthology | respiratory chain complex II | AT5G40650 |
| GO:0005749 | ISO | PLAZA Integrative Orthology | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | AT5G40650 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G40650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012675 | Beta-grasp domain superfamily |
| IPR001041 | 2Fe-2S ferredoxin-type iron-sulfur binding domain |
| IPR009051 | Alpha-helical ferredoxin |
| IPR004489 | Succinate dehydrogenase/fumarate reductase iron-sulphur protein |
| IPR036010 | 2Fe-2S ferredoxin-like superfamily |
| IPR025192 | Succinate dehydogenase/fumarate reductase N-terminal |
| Mapman id | Description |
|---|---|
| 2.3.6.1.2 | Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.iron-sulphur component SDH2 |