Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10810 LG-4 + View
Acer truncatum Atru.chr11.1926 chr11 - View
Actinidia chinensis Actinidia24656 Lachesis_group12 - View
Arabidopsis lyrata AL2G29320 scaffold_2 - View
Avicennia marina MSTRG.647 ScioBoG_102831_HRSCAF_103044 + View
Aquilegia oxysepala Aqoxy3G03150 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.91JL5L PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G70070 DEAD/DEAH box helicase Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. EMBRYO DEFECTIVE 25 (EMB25)%3B FUNCTIONS IN: RNA helicase activity%2C ATP-dependent helicase activity%3B INVOLVED IN: posttranscriptional gene silencing%2C plasmodesmata-mediated intercellular transport%2C embryo development ending in seed dormancy%3B LOCATED IN: stress granule%2C chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DSH%2C C-terminal (InterPro:IPR012961)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein (TAIR:AT3G46960.1)%3B Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027%3B Bacteria - 4600%3B Metazoa - 5457%3B Fungi - 2724%3B Plants - 1158%3B Viruses - 307%3B Other Eukaryotes - 6123 (source: NCBI BLink). Chr1 - View
Brassica napus C06p43940 C06 - View
Brassica napus A07p36480 A07 - View
Brassica rapa BraA07t31219Z A07 - View
Beta vulgaris EL10Ac6g13095 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G549.5 PGAv.1.6.scaffold549 + View
Corylus avellana Haze_12116 Similar to ISE2: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g13990 DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic chr11 - View
Citrus clementina Ciclev10030551m.g scaffold_4 + View
Carpinus fangiana Cfa009084 Cfa03 - View
Cardamine hirsuta CARHR063170 Helicase, putative Chr2 - View
Carya illinoinensis CiPaw.05G144400 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Chr05 - View
Corchorus olitorius COL.COLO4_36274 hypothetical protein AWUE01023078.1 - View
Carica papaya Cpa.g.sc5.319 supercontig_5 - View
Chenopodium quinoa AUR62026525 ISE2: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic C_Quinoa_Scaffold_4244 + View
Chenopodium quinoa AUR62026327 ISE2: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic C_Quinoa_Scaffold_3298 + View
Daucus carota DCAR_007115 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv24923 GWHABJS00000018 + View
Erigeron canadensis ECA246G0840 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B03380 Chr02 - View
Erythranthe guttata Migut.L01377 scaffold_12 - View
Eutrema salsugineum Thhalv10018027m.g PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) scaffold_9 + View
Fragaria x ananassa FAN12G3712 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Fvb4-3 - View
Fragaria x ananassa FAN07G0147 KOG0948 - Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily Fvb4-4 - View
Fragaria x ananassa FAN17G1611 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Fvb4-2 - View
Fragaria x ananassa FAN22G1767 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Fvb4-1 + View
Fragaria vesca FvH4_4g35290 KOG0948 - Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily Fvb4 + View
Gossypium hirsutum Gohir.D05G322000 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) D05 + View
Glycine max Glyma.02G026751 3.6.4.13 - RNA helicase Gm02 + View
Glycine max Glyma.01G038100 PTHR24031//PTHR24031:SF122 - RNA HELICASE // SUBFAMILY NOT NAMED Gm01 - View
Gossypium raimondii Gorai.009G345500 Chr09 + View
Helianthus annuus HanXRQChr15g0476051 Probable DEAD/DEAH box helicase, putative HanXRQChr15 + View
Lupinus albus Lalb_Chr05g0217331 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) Lalb_Chr05 - View
Lotus japonicus Lj2g0000675 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) chr2 - View
Lonicera japonica Lj3A1046T50 GWHAAZE00000003 - View
Malus domestica MD16G1083800 DEAD/DEAH box helicase Chr16 - View
Manihot esculenta Manes.05G093300 Chromosome05 + View
Medicago truncatula Medtr5g036660 DEAD-box ATP-dependent RNA helicase ISE2 chr5 - View
Nelumbo nucifera Nn4g22952 chr4 + View
Nicotiana tabacum Nitab4.5_0001030g0130 Helicase, superfamily 1/2, ATP-binding domain, DSH, C-terminal, P-loop containing nucleoside triphosphate hydrolase, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, Helicase, C-terminal Nitab4.5_0001030 - View
Olea europaea Oeu015868.1 scaffold1632 + View
Petunia axillaris Peaxi162Scf00828g00118 RNA helicase, ATP-dependent, SK12/DOB1 protein Peaxi162Scf00828 + View
Punica granatum PGR102G1282 NC_045129.1 + View
Prunus persica Prupe.1G262200 PTHR24031//PTHR24031:SF122 - RNA HELICASE // SUBFAMILY NOT NAMED Pp01 + View
Papaver somniferum PSO832G4178 NC_039367.1 - View
Populus trichocarpa Potri.010G038500 KOG0948 - Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily Chr10 + View
Phaseolus vulgaris Phvul.002G077700 PTHR24031//PTHR24031:SF122 - RNA HELICASE // SUBFAMILY NOT NAMED Chr02 - View
Quercus lobata QL03p067425 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0444891 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0126700 chr12 + View
Salvia bowleyana SalBow2G0827 GWHASIU00000007 + View
Salvia bowleyana SalBow2G2106 GWHASIU00000007 + View
Salix brachista Sabra10G0027700 GWHAAZH00000010 - View
Solanum lycopersicum Solyc05g006530.4 DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic (AHRD V3.3 *** A0A2G2VM82_CAPBA) SL4.0ch05 + View
Schrenkiella parvula Sp5g25190 PF00270//PF00271//PF08148 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) ch5-6 - View
Solanum pennellii Sopen05g002480 Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. | EMBRYO DEFECTIVE 25 (EMB25) | FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity | INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy | LOCATED IN: stress granule, chloroplast stroma, chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DSH, C-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400022635 Increased size exclusion limit 2 ST4.03ch05 - View
Selenicereus undatus Hund25300 Scaffold_3410 + View
Trochodendron aralioides TAR622G0260 group8 - View
Theobroma cacao Thecc.02G238700 DEAD/DEAH box helicase Chromosome_2 - View
Trifolium pratense TPR.G17327 Tp57577_TGAC_v2_scaf_227 - View
Tripterygium wilfordii TWI36G1227 NC_052237.1 + View
Vaccinium macrocarpon vmacro16300 Similar to ISE2: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0407 CM024074.1 + View
Vitis vinifera GSVIVG01020137001 chr1 + View
Zea mays Zm00001eb254030 Zm00001e015769 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 5 + View