Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G9870 LG-2 + View
Arabidopsis lyrata AL2G29870 scaffold_2 - View
Arabidopsis lyrata AL2G16010 scaffold_2 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KUDM62 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I8XWBG PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT1G70500 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G23460.1)%3B Has 4030 Blast hits to 4010 proteins in 486 species: Archae - 4%3B Bacteria - 1128%3B Metazoa - 14%3B Fungi - 1268%3B Plants - 1483%3B Viruses - 0%3B Other Eukaryotes - 133 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR1152G033 AmTr_v1.0_scaffold00085 - View
Brassica carinata BcaB03g14809 ChrB03 - View
Brassica napus C08p21890 C08 + View
Brassica napus A07p36890 A07 - View
Brassica napus A09p17430 A09 + View
Brassica rapa BraA09t39613Z A09 - View
Beta vulgaris EL10Ac6g13775 K01184 - polygalacturonase (E3.2.1.15) Chr6_EL10_PGA_scaffold0 + View
Cicer arietinum L. Ca_04584_v3 Ca_LG2_v3 - View
Citrus clementina Ciclev10033716m.g scaffold_4 - View
Ceratophyllum demersum CDE06G2603 4 - View
Carpinus fangiana Cfa007408 Cfa03 + View
Cardamine hirsuta CARHR023890 Polygalacturonase Chr1 + View
Cardamine hirsuta CARHR052390 Polygalacturonase, putative Chr2 + View
Carya illinoinensis CiPaw.05G185500 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Chr05 - View
Corchorus olitorius COL.COLO4_24228 Glycoside hydrolase%2C family 28 AWUE01018461.1 + View
Capsella rubella Carub.0002s0475 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN scaffold_2 + View
Cucumis sativus L. CsaV3_5G031360 Polygalacturonase, putative chr5 - View
Daucus carota DCAR_031114 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_024448 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv24816 GWHABJS00000018 - View
Erigeron canadensis ECA234G1284 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.H02537 Chr08 - View
Erythranthe guttata Migut.H00099 scaffold_8 + View
Eutrema salsugineum Thhalv10023404m.g PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN scaffold_8 + View
Fragaria x ananassa FAN22G1107 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb4-1 + View
Fragaria x ananassa FAN12G2410 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Fvb4-3 + View
Fragaria x ananassa FAN05G5021 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-3 + View
Fragaria x ananassa FAN14G2349 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-1 + View
Gossypium hirsutum Gohir.D05G314700 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE D05 - View
Gossypium hirsutum Gohir.A05G313300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE A05 - View
Glycine max Glyma.01G027900 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Gm01 - View
Glycine max Glyma.02G037300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Gm02 + View
Gossypium raimondii Gorai.009G336100 Chr09 - View
Gossypium raimondii Gorai.005G181300 Chr05 + View
Gossypium raimondii Gorai.012G172100 Chr12 - View
Helianthus annuus HanXRQChr12g0383691 Probable pectin lyase-like superfamily protein HanXRQChr12 + View
Hydrangea macrophylla Hma1.2p1_0223F.1_g094195 Hma1.2p1_0223F.1 - View
Lupinus albus Lalb_Chr05g0216651 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Lalb_Chr05 - View
Lotus japonicus Lj2g0018230 PTHR31375:SF12 - POLYGALACTURONASE chr2 - View
Lonicera japonica Lj3C1054T19 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_4_4860 PTHR31375:SF12 - POLYGALACTURONASE Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_8_155280 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Lsat_1_v8_lg_8 - View
Magnolia biondii MBI16_g14594_MAGBIO AED:0.14 Chr16 - View
Manihot esculenta Manes.15G149400 Chromosome15 + View
Manihot esculenta Manes.17G113400 Chromosome17 - View
Manihot esculenta Manes.13G027100 Chromosome13 - View
Medicago truncatula Medtr5g033680 polygalacturonase chr5 - View
Medicago truncatula Medtr8g065010 polygalacturonase plant-like protein chr8 - View
Nelumbo nucifera Nn4g22693 chr4 - View
Nicotiana tabacum Nitab4.5_0000338g0230 Glycoside hydrolase, family 28, Pectin lyase fold/virulence factor, Pectin lyase fold, Parallel beta-helix repeat Nitab4.5_0000338 + View
Olea europaea Oeu059925.1 chr8 - View
Punica granatum PGR102G3127 NC_045129.1 + View
Punica granatum PGR142G2289 NC_045128.1 - View
Pisum sativum Psat2g103440 Glycosyl hydrolases family 28 chr2LG1 - View
Populus trichocarpa Potri.008G188300 PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Chr08 - View
Phaseolus vulgaris Phvul.003G061600 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Chr03 - View
Phaseolus vulgaris Phvul.002G063500 PTHR31375:SF12 - POLYGALACTURONASE Chr02 - View
Quercus lobata QL03p058763 3 - View
Rhododendron simsii Rhsim12G0043800 chr12 + View
Salvia bowleyana SalBow8G0085 GWHASIU00000004 - View
Salix brachista Sabra08G0142600 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0001090 GWHAASQ00000011 + View
Sechium edule Sed0018652 LG03 + View
Sechium edule Sed0024908 LG04 - View
Sapria himalayana SHI17687 scaffold23_8152026 + View
Solanum lycopersicum Solyc05g005040.4 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q38958_ARATH) SL4.0ch05 - View
Solanum pennellii Sopen05g001060 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400013497 Polygalacturonase ST4.03ch05 + View
Selenicereus undatus Hund06004 Scaffold_19641 - View
Trochodendron aralioides TAR622G1285 group8 + View
Tripterygium wilfordii TWI36G0399 NC_052237.1 - View
Tripterygium wilfordii TWI75G0467 NC_052253.1 - View
Vigna mungo VMungo1215G2806 CM024074.1 - View
Vitis vinifera GSVIVG01013800001 chr1 - View