Gene: DCAR_024448

General Information

Structural Information

Species Daucus carota
Gene Identifier DCAR_024448
Transcript Identifier DCAR_024448
Gene Type Coding gene
Location DCARv2_Chr7 : 14207224-14210225 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000037
#Genes/#Species 5045/97
Phylogenetic origin

ID ORTHO05D001500
#Genes/#Species 397/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

pacid 36060543
id DCAR_024448.v1.0
uniprot A0A164TBN6

Descriptions

Short descriptions
Ortholog descriptions

Description hypothetical protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0008152	IEA	GOA Database	metabolic process
GO:0009826	ISO	PLAZA Integrative Orthology	unidimensional cell growth	AT3G26610
GO:0045490	ISO	PLAZA Integrative Orthology	pectin catabolic process	AT3G26610
GO:0060773	ISO	PLAZA Integrative Orthology	flower phyllotactic patterning	AT3G26610
GO:0052546	ISO	PLAZA Integrative Orthology	cell wall pectin metabolic process	AT3G26610

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004650	IEA	GOA Database	polygalacturonase activity
GO:0004650	IEA	InterPro	polygalacturonase activity
GO:0016798	IEA	GOA Database	hydrolase activity, acting on glycosyl bonds
GO:0016787	IEA	GOA Database	hydrolase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	IEA	GOA Database	cell wall
GO:0048046	ISO	PLAZA Integrative Orthology	apoplast	AT3G26610

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000743	Glycoside hydrolase, family 28
IPR012334	Pectin lyase fold
IPR011050	Pectin lyase fold/virulence factor
IPR006626	Parallel beta-helix repeat

Mapman id	Description
21.3.5.1.3	Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (PGX1)