Gene: Potri.008G188300
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.008G188300
- Transcript Identifier Potri.008G188300.1
- Gene Type Coding gene
- Location Chr08 : 13180026-13183176 : negative
Gene Family Information
- ID HOM05D000037
- #Genes/#Species 5045/97
- Phylogenetic origin
- ID ORTHO05D001500
- #Genes/#Species 397/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.008G188300.v4.1
- pacid 42807259
- synonym eugene3.00081775
Descriptions
- Description PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0009826 | ISO | PLAZA Integrative Orthology | unidimensional cell growth | AT3G26610 |
| GO:0045490 | ISO | PLAZA Integrative Orthology | pectin catabolic process | AT3G26610 |
| GO:0060773 | ISO | PLAZA Integrative Orthology | flower phyllotactic patterning | AT3G26610 |
| GO:0052546 | ISO | PLAZA Integrative Orthology | cell wall pectin metabolic process | AT3G26610 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004650 | IEA | InterPro | polygalacturonase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT3G26610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.1.3 | Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (PGX1) |