Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038822 PREDICTED: uncharacterized protein LOC104426377 [Eucalyptus grandis] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G23080 LG-1 - View
Acer truncatum Atru.chr3.4216 chr3 - View
Acer truncatum Atru.chr8.2243 chr8 + View
Actinidia chinensis Actinidia05366 Lachesis_group20 - View
Actinidia chinensis Actinidia20734 Lachesis_group0 - View
Arabidopsis lyrata AL4G35210 scaffold_4 + View
Arabidopsis lyrata AL6G10620 scaffold_6 + View
Amaranthus hybridus Ah.12g058620 Probable E3 ubiquitin-protein ligase XBOS34 (EC 2.3.2.27) (Ankyrin repeat domain and RING finger-containing protein XBOS34) (RING-type E3 ubiquitin transferase XBOS34) (XB3 protein homolog 4) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy4G02557 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P8JV7Z PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VN0MC0 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT2G38185 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G01450 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.2)%3B Has 1494 Blast hits to 1490 proteins in 181 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 838%3B Fungi - 48%3B Plants - 298%3B Viruses - 88%3B Other Eukaryotes - 222 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0618G095 AmTr_v1.0_scaffold00029 + View
Brassica carinata BcaC01g05563 ChrC01 - View
Brassica carinata BcaB01g06229 ChrB01 - View
Brassica napus A03p21080 A03 + View
Brassica napus A05p07830 A05 - View
Brassica rapa BraA05t19751Z A05 - View
Brassica rapa BraA03t11349Z A03 + View
Beta vulgaris EL10Ac5g12559 PF13920//PF16041 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) // Domain of unknown function (DUF4793) (DUF4793) Chr5_EL10_PGA_scaffold2 - View
Cannabis sativa CANSAT35G0330 NC_044378.1 - View
Corylus avellana Haze_21004 Similar to APD1: E3 ubiquitin-protein ligase APD1 (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_24330 Similar to APD2: E3 ubiquitin-protein ligase APD2 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g14240 Putative RING/U-box superfamily protein chr1 + View
Coffea canephora Cc06_g01340 Putative RING/U-box superfamily protein chr6 - View
Citrus clementina Ciclev10030173m.g scaffold_8 + View
Citrus clementina Ciclev10013662m.g scaffold_6 + View
Carpinus fangiana Cfa017204 Cfa07 - View
Cardamine hirsuta CARHR132790 Ubiquitin-protein ligase, putative Chr4 + View
Cardamine hirsuta CARHR211820 RING/U-box superfamily protein Chr6 - View
Carya illinoinensis CiPaw.09G209300 PTHR12183//PTHR12183:SF16 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Chr09 + View
Carya illinoinensis CiPaw.10G156700 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Chr10 + View
Carya illinoinensis CiPaw.14G059300 PF16040//PF16041 - Domain of unknown function (DUF4792) (DUF4792) // Domain of unknown function (DUF4793) (DUF4793) Chr14 - View
Corchorus olitorius COL.COLO4_14535 Zinc finger%2C RING-type AWUE01015434.1 - View
Carica papaya Cpa.g.sc11.143 supercontig_11 + View
Chenopodium quinoa AUR62010456 Protein of unknown function C_Quinoa_Scaffold_1280 - View
Chenopodium quinoa AUR62030456 Protein of unknown function C_Quinoa_Scaffold_3973 + View
Capsella rubella Carub.0004s2017 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED scaffold_4 + View
Capsella rubella Carub.0006s0038 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED scaffold_6 + View
Davidia involucrata Dinv23109 GWHABJS00000015 + View
Davidia involucrata Dinv28643 GWHABJS00000010 + View
Durio zibethinus Duzib168G1714 NW_019168159.1 - View
Durio zibethinus Duzib106G1953 NW_019168492.1 + View
Durio zibethinus Duzib128G0126 NW_019168481.1 + View
Durio zibethinus Duzib093G1794 NW_019167937.1 + View
Eucalyptus grandis Eucgr.K02982 Chr11 - View
Eucalyptus grandis Eucgr.J01909 Chr10 - View
Erythranthe guttata Migut.J00166 scaffold_10 - View
Eutrema salsugineum Thhalv10017777m.g PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED scaffold_10 + View
Fragaria x ananassa FAN02G2396 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6-4 - View
Fragaria x ananassa FAN14G4049 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6-1 + View
Fragaria x ananassa FAN09G4022 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6-2 + View
Fragaria x ananassa FAN14G5042 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6-1 + View
Fragaria x ananassa FAN05G5492 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6-3 + View
Fragaria x ananassa FAN25G2787 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb3-1 - View
Fragaria vesca FvH4_3g38600 PTHR12183//PTHR12183:SF16 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb3 + View
Fragaria vesca FvH4_6g11430 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Fvb6 - View
Gossypium hirsutum Gohir.A05G088600 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED A05 - View
Gossypium hirsutum Gohir.A01G227400 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED A01 - View
Gossypium hirsutum Gohir.D01G217200 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED D01 - View
Gossypium hirsutum Gohir.D05G089600 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED D05 - View
Glycine max Glyma.07G150500 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Gm07 + View
Glycine max Glyma.18G062700 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Gm18 - View
Glycine max Glyma.18G201500 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Gm18 + View
Gossypium raimondii Gorai.002G263500 Chr02 - View
Gossypium raimondii Gorai.009G092000 Chr09 - View
Lupinus albus Lalb_Chr19g0124551 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Lalb_Chr19 + View
Lotus japonicus Lj1g0003596 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED chr1 - View
Lotus japonicus Lj6g0010194 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED chr6 - View
Lonicera japonica Lj2C75T2 GWHAAZE00000002 - View
Malus domestica MD12G1166600 RING/U-box superfamily protein Chr12 + View
Malus domestica MD03G1070000 RING/U-box superfamily protein Chr03 - View
Malus domestica MD11G1073800 RING/U-box superfamily protein Chr11 - View
Malus domestica MD04G1153100 RING/U-box superfamily protein Chr04 + View
Manihot esculenta Manes.09G104925 Chromosome09 + View
Medicago truncatula Medtr7g068580 ubiquitin-protein ligase, putative chr7 + View
Olea europaea Oeu063405.1 scaffold939 - View
Petunia axillaris Peaxi162Scf00141g01117 RING/U-box superfamily protein Peaxi162Scf00141 + View
Punica granatum PGR004G0061 NC_045131.1 - View
Prunus persica Prupe.6G057100 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Pp06 - View
Prunus persica Prupe.6G277400 Pp06 + View
Papaver somniferum PSO339G0928 NC_039366.1 - View
Papaver somniferum PSO384G0593 NC_039368.1 + View
Papaver somniferum PSO801G0214 NW_020628818.1 - View
Populus trichocarpa Potri.006G100400 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Chr06 + View
Populus trichocarpa Potri.016G116300 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Chr16 + View
Phaseolus vulgaris Phvul.008G103400 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Chr08 + View
Quercus lobata QL07p019775 7 + View
Quercus lobata QL01p038315 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0069661 RcHm_v2.0_Chr5 + View
Rosa chinensis RcHm_v2.0_Chr3g0463121 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim04G0128400 chr04 - View
Salvia bowleyana SalBow5G1578 GWHASIU00000003 - View
Salix brachista Sabra16G0111900 GWHAAZH00000016 + View
Salix brachista Sabra06G0077200 GWHAAZH00000006 + View
Simmondsia chinensis Sc01g0006430 GWHAASQ00000001 - View
Solanum lycopersicum Solyc09g005320.3 RING/U-box superfamily protein (AHRD V3.3 *** Q0WS06_ARATH) SL4.0ch09 + View
Schrenkiella parvula Sp6g40740 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED ch6-6 - View
Schrenkiella parvula Sp4g20510 PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED ch4-6 + View
Solanum pennellii Sopen09g001290 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400023075 Ubiquitin-protein ligase ST4.03ch09 - View
Selenicereus undatus Hund14294 Scaffold_33677 - View
Selenicereus undatus Hund11006 Scaffold_10417 - View
Trochodendron aralioides TAR636G0792 group1 - View
Trochodendron aralioides TAR633G1533 group2 + View
Theobroma cacao Thecc.05G015900 RING/U-box superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816193 uncharacterized protein LOC104816193 NW_010965775.1 + View
Tripterygium wilfordii TWI53G2049 NC_052244.1 + View
Tripterygium wilfordii TWI77G0956 NC_052236.1 + View
Vaccinium macrocarpon vmacro08875 Similar to APD1: E3 ubiquitin-protein ligase APD1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2266 CM024070.1 - View
Vitis vinifera GSVIVG01024737001 chr6 + View
Vitis vinifera GSVIVG01011154001 chr8 + View