Gene: Carub.0004s2017
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s2017
- Transcript Identifier Carub.0004s2017.1
- Gene Type Coding gene
- Location scaffold_4 : 11062951-11065319 : positive
Gene Family Information
- ID HOM05D001948
- #Genes/#Species 339/86
- Phylogenetic origin
- ID ORTHO05D001873
- #Genes/#Species 343/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s2017.v1.1
- pacid 39237645
- synonym Carubv10023281m.g
Descriptions
- Description PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT2G38220 |
| GO:0000278 | ISO | PLAZA Integrative Orthology | mitotic cell cycle | AT2G38220 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009705 | ISO | PLAZA Integrative Orthology | plant-type vacuole membrane | AT2G38185 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT2G38185 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.7.1.4 | Cell cycle organisation.germline development.male germ cell division.E3 ubiquitin protein ligase (APD) |