Gene: Sopen09g001290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g001290
  • Transcript Identifier Sopen09g001290.2
  • Gene Type Coding gene
  • Location Spenn-ch09 : 239819-243982 : positive

Gene Family Information

  • ID HOM05D001948
  • #Genes/#Species 339/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g001290.2

Descriptions

  • Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G01450
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT5G01450
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G01450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G01450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT5G01450
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G01450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044586 E3 ubiquitin-protein ligase APD1/2/3/4
IPR032008 Domain of unknown function DUF4792
Mapman id Description
13.7.1.4 Cell cycle organisation.germline development.male germ cell division.E3 ubiquitin protein ligase (APD)