Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016479 PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Nelumbo nucifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13230 LG-8 + View
Acer truncatum Atru.chr3.282 chr3 + View
Acer truncatum Atru.chr5.2639 chr5 + View
Acer truncatum Atru.chr13.727 chr13 - View
Actinidia chinensis Actinidia38066 Lachesis_group7 - View
Actinidia chinensis Actinidia08284 Lachesis_group27 - View
Actinidia chinensis Actinidia01093 Lachesis_group26 - View
Arabidopsis lyrata AL3G47250 scaffold_3 + View
Arabidopsis lyrata AL7G17280 scaffold_7 - View
Avicennia marina MSTRG.27737 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.5355 ScioBoG_102838_HRSCAF_103081 + View
Amaranthus hybridus Ah.01g017920 Polyadenylate-binding protein 8 (PABP-8) (Poly(A)-binding protein 8) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy5G01183 CHR05 + View
Aquilegia oxysepala Aqoxy6G01254 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AS7J9R PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT3G19350 maternally expressed pab C-terminal Encodes a the C-terminal domain of poly(A) binding proteins. MPC is imprinted such that only the maternal allele is expressed in the endosperm. MPC is silenced by the action of MET1 and its expression is promoted by DEM. maternally expressed pab C-terminal (MPC)%3B CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004)%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2)%3B Has 865 Blast hits to 863 proteins in 191 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 523%3B Fungi - 105%3B Plants - 148%3B Viruses - 0%3B Other Eukaryotes - 89 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G15500 RNA-binding protein RNA-binding protein%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1)%3B Has 110 Blast hits to 110 proteins in 32 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 13%3B Plants - 93%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G34110 poly(A) binding protein 2 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. poly(A) binding protein 2 (PAB2)%3B FUNCTIONS IN: RNA binding%2C translation initiation factor activity%3B INVOLVED IN: response to salt stress%2C translational initiation%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Polyadenylate binding protein%2C human types 1%2C 2%2C 3%2C 4 (InterPro:IPR006515)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2)%3B Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430%3B Bacteria - 568582%3B Metazoa - 213912%3B Fungi - 30250%3B Plants - 62241%3B Viruses - 64851%3B Other Eukaryotes - 27728 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC06g36061 ChrC06 + View
Brassica carinata BcaC01g00932 ChrC01 - View
Brassica carinata BcaB07g31788 ChrB07 - View
Brassica carinata BcaNung03792 Contig1304 + View
Brassica napus A07p05250 A07 - View
Brassica napus A08p17140 A08 - View
Brassica napus C01p04740 C01 - View
Brassica napus A09p10780 A09 + View
Brassica napus C07p08350 C07 - View
Brassica napus C03p86100 C03 - View
Brassica oleracea BolC3t20898H C3 - View
Brassica rapa BraA05t21864Z A05 - View
Brassica rapa BraA08t33675Z A08 - View
Beta vulgaris EL10Ac9g22321 K13126 - polyadenylate-binding protein (PABPC) Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G1231.30 PGAv.1.6.scaffold1231 + View
Cannabis sativa CANSAT01G2843 NC_044373.1 - View
Cannabis sativa CANSAT25G1193 NC_044370.1 - View
Cicer arietinum L. Ca_13281_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_18712_v3 Ca_LG6_v3 - View
Corylus avellana Haze_15370 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_18044 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) 7 - View
Corylus avellana Haze_10113 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc10_g04690 Polyadenylate-binding protein 2 chr10 - View
Coffea canephora Cc02_g19020 Polyadenylate-binding protein 2 chr2 - View
Citrus clementina Ciclev10025109m.g scaffold_7 - View
Citrus clementina Ciclev10027999m.g scaffold_8 + View
Citrus clementina Ciclev10000537m.g scaffold_5 + View
Carpinus fangiana Cfa004043 Cfa01 - View
Carpinus fangiana Cfa004548 Cfa02 - View
Cardamine hirsuta CARHR242230 Polyadenylate-binding protein, putative Chr7 + View
Cardamine hirsuta CARHR242740 Poly(A)-binding protein Chr7 - View
Cardamine hirsuta CARHR105810 Polyadenylate-binding protein, putative Chr3 + View
Carya illinoinensis CiPaw.16G040100 K13126 - polyadenylate-binding protein (PABPC) Chr16 + View
Carya illinoinensis CiPaw.05G008500 K13126 - polyadenylate-binding protein (PABPC) Chr05 - View
Carya illinoinensis CiPaw.15G054100 K13126 - polyadenylate-binding protein (PABPC) Chr15 + View
Citrullus lanatus ClCG02G006080 Polyadenylate-binding protein, putative CG_Chr02 - View
Citrullus lanatus ClCG05G010160 Polyadenylate-binding protein, putative CG_Chr05 - View
Cucumis melo MELO3C018462.2 Polyadenylate-binding protein chr01 - View
Cucumis melo MELO3C019525.2 Polyadenylate-binding protein chr06 - View
Corchorus olitorius COL.COLO4_32626 hypothetical protein AWUE01021138.1 + View
Carica papaya Cpa.g.sc200.24 supercontig_200 + View
Carica papaya Cpa.g.sc55.115 supercontig_55 + View
Chenopodium quinoa AUR62010255 PAB8: Polyadenylate-binding protein 8 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62013237 PAB8: Polyadenylate-binding protein 8 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0007s0631 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_3G018370 Polyadenylate-binding protein chr3 + View
Cucumis sativus L. CsaV3_7G008460 Polyadenylate-binding protein chr7 + View
Daucus carota DCAR_008811 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_029076 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_012787 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_022009 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv35937 GWHABJS00000002 + View
Davidia involucrata Dinv39286 GWHABJS00000011 + View
Davidia involucrata Dinv15737 GWHABJS00000005 - View
Davidia involucrata Dinv42174 GWHABJS00000002 + View
Durio zibethinus Duzib187G0139 NW_019167860.1 + View
Durio zibethinus Duzib052G1236 NW_019167849.1 + View
Durio zibethinus Duzib147G0577 NW_019168470.1 + View
Durio zibethinus Duzib132G0741 NW_019167915.1 - View
Erigeron canadensis ECA236G2896 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA234G4170 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA247G2488 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F00193 Chr06 - View
Eucalyptus grandis Eucgr.I01129 Chr09 + View
Erythranthe guttata Migut.N01177 scaffold_14 + View
Erythranthe guttata Migut.B00368 scaffold_2 - View
Eutrema salsugineum Thhalv10022589m.g PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED scaffold_11 - View
Eutrema salsugineum Thhalv10024683m.g PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED scaffold_1 - View
Fragaria x ananassa FAN27G0149 K13126 - polyadenylate-binding protein (PABPC) Fvb2-1 + View
Fragaria x ananassa FAN27G2027 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-1 + View
Fragaria x ananassa FAN24G0461 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-2 - View
Fragaria x ananassa FAN20G2054 K13126 - polyadenylate-binding protein (PABPC) Fvb2-3 - View
Fragaria x ananassa FAN15G3640 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-4 + View
Fragaria x ananassa FAN20G2908 K13126 - polyadenylate-binding protein (PABPC) Fvb2-3 - View
Fragaria x ananassa FAN15G2199 K13126 - polyadenylate-binding protein (PABPC) Fvb2-4 + View
Fragaria vesca FvH4_2g05720 K13126 - polyadenylate-binding protein (PABPC) Fvb2 + View
Fragaria vesca FvH4_2g34040 K13126 - polyadenylate-binding protein (PABPC) Fvb2 + View
Gossypium hirsutum Gohir.A13G042600 K13126 - polyadenylate-binding protein (PABPC) A13 - View
Gossypium hirsutum Gohir.A06G020400 PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) A06 - View
Gossypium hirsutum Gohir.D13G041000 K13126 - polyadenylate-binding protein (PABPC) D13 - View
Gossypium hirsutum Gohir.A03G187700 K13126 - polyadenylate-binding protein (PABPC) A03 + View
Gossypium hirsutum Gohir.D02G208500 K13126 - polyadenylate-binding protein (PABPC) D02 + View
Gossypium hirsutum Gohir.A05G204300 K13126 - polyadenylate-binding protein (PABPC) A05 - View
Glycine max Glyma.02G103900 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Gm02 - View
Glycine max Glyma.07G215300 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Gm07 - View
Glycine max Glyma.14G084500 K13126 - polyadenylate-binding protein (PABPC) Gm14 + View
Glycine max Glyma.06G041700 K13126 - polyadenylate-binding protein (PABPC) Gm06 - View
Gossypium raimondii Gorai.009G214100 Chr09 - View
Gossypium raimondii Gorai.013G046000 Chr13 - View
Gossypium raimondii Gorai.005G236500 Chr05 + View
Helianthus annuus HanXRQChr04g0128121 Putative RNA recognition motif domain, eukaryote; Polyadenylate binding protein, human types 1, 2, 3, 4; Nucleotide-binding alpha-beta plait domain HanXRQChr04 + View
Lupinus albus Lalb_Chr05g0219321 PF00658 - Poly-adenylate binding protein, unique domain (PABP) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0384871 PF00658 - Poly-adenylate binding protein, unique domain (PABP) Lalb_Chr16 - View
Lupinus albus Lalb_Chr14g0368571 K13126 - polyadenylate-binding protein (PABPC) Lalb_Chr14 + View
Lupinus albus Lalb_Chr22g0355031 K13126 - polyadenylate-binding protein (PABPC) Lalb_Chr22 + View
Lupinus albus Lalb_Chr09g0328431 K13126 - polyadenylate-binding protein (PABPC) Lalb_Chr09 - View
Lotus japonicus Lj4g0016078 K13126 - polyadenylate-binding protein (PABPC) chr4 + View
Lotus japonicus Lj1g0013740 K13126 - polyadenylate-binding protein (PABPC) chr1 + View
Lonicera japonica Lj5C211G15 GWHAAZE00000005 - View
Lonicera japonica Lj9C355T5 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_1_21861 K13126 - polyadenylate-binding protein (PABPC) Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_0_4140 K13126 - polyadenylate-binding protein (PABPC) Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_5_115801 Lsat_1_v8_lg_5 + View
Malus domestica MD08G1096400 poly(A) binding protein 2 Chr08 + View
Malus domestica MD05G1085100 poly(A) binding protein 8 Chr05 - View
Malus domestica MD15G1079100 poly(A) binding protein 2 Chr15 + View
Manihot esculenta Manes.07G073000 Chromosome07 - View
Manihot esculenta Manes.12G106500 Chromosome12 - View
Manihot esculenta Manes.13G120600 Chromosome13 + View
Manihot esculenta Manes.10G078200 Chromosome10 + View
Medicago truncatula Medtr4g085540 polyadenylate-binding protein chr4 + View
Nelumbo nucifera Nn5g30361 chr5 - View
Nelumbo nucifera Nn1g04780 chr1 + View
Olea europaea Oeu017482.1 chr3 + View
Olea europaea Oeu010385.1 chr15 - View
Petunia axillaris Peaxi162Scf00016g02127 Polyadenylate-binding protein 8 Peaxi162Scf00016 - View
Punica granatum PGR142G0697 NC_045128.1 + View
Prunus persica Prupe.1G432200 Pp01 + View
Prunus persica Prupe.8G129400 K13126 - polyadenylate-binding protein (PABPC) Pp08 - View
Papaver somniferum PSO541G0532 NC_039363.1 - View
Papaver somniferum PSO210G5692 NC_039359.1 - View
Papaver somniferum PSO170G3339 NC_039360.1 + View
Papaver somniferum PSO675G2752 NC_039358.1 - View
Populus trichocarpa Potri.009G099300 PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) Chr09 + View
Populus trichocarpa Potri.001G304000 K13126 - polyadenylate-binding protein (PABPC) Chr01 + View
Populus trichocarpa Potri.002G124200 K13126 - polyadenylate-binding protein (PABPC) Chr02 + View
Phaseolus vulgaris Phvul.003G047500 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Chr03 - View
Phaseolus vulgaris Phvul.009G066940 K13126 - polyadenylate-binding protein (PABPC) Chr09 - View
Quercus lobata QL06p040606 6 + View
Quercus lobata QL11p034784 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0256591 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr6g0308331 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0226200 chr07 + View
Striga asiatica SGA_v2.0_scaffold13G06604 scaffold13 - View
Salvia bowleyana SalBow3G3529 GWHASIU00000006 - View
Salix brachista Sabra09G0075600 GWHAAZH00000009 + View
Salix brachista Sabra16G0190700 GWHAAZH00000016 + View
Salix brachista Sabra14G0017400 GWHAAZH00000014 + View
Simmondsia chinensis Sc08g0001670 GWHAASQ00000008 + View
Simmondsia chinensis Sc15g0005960 GWHAASQ00000015 + View
Sechium edule Sed0018598 LG05 - View
Sechium edule Sed0013120 LG13 + View
Sechium edule Sed0025100 LG10 + View
Solanum lycopersicum Solyc01g107870.3 Polyadenylate-binding protein (AHRD V3.3 *** Q9M6E6_TOBAC) SL4.0ch01 + View
Schrenkiella parvula Sp3g17410 PF00658 - Poly-adenylate binding protein, unique domain (PABP) ch3-1 + View
Schrenkiella parvula Sp3g28770 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED ch3-5 + View
Schrenkiella parvula Sp7g31820 K13126 - polyadenylate-binding protein (PABPC) ch7-5 + View
Solanum pennellii Sopen12g030620 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. | poly(A) binding protein 8 (PAB8) | CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein , RNA recognition motif, RNP-1 , Polyadenylate binding protein, human types 1, 2, 3, 4 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 ., 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) Spenn-ch12 + View
Solanum pennellii Sopen01g050030 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. | poly(A) binding protein 2 (PAB2) | FUNCTIONS IN: RNA binding, translation initiation factor activity | INVOLVED IN: response to salt stress, translational initiation | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 17 growth stages | CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein , RNA recognition motif, RNP-1 , Polyadenylate binding protein, human types 1, 2, 3, 4 , Paraneoplastic encephalomyelitis antigen , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025777 Poly(A)-binding protein ST4.03ch01 + View
Selenicereus undatus Hund00132 Scaffold_33678 - View
Selenicereus undatus Hund06338 Scaffold_33676 + View
Trochodendron aralioides TAR628G1139 group5 + View
Trochodendron aralioides TAR376G0162 group14 + View
Trochodendron aralioides TAR381G1102 group11 - View
Theobroma cacao Thecc.02G103900 Poly(A) binding protein 8 Chromosome_2 - View
Theobroma cacao Thecc.01G060600 Poly(A) binding protein 8 Chromosome_1 - View
Theobroma cacao Thecc.08G003300 Poly(A) binding protein 8 Chromosome_8 + View
Tarenaya hassleriana THA.LOC104804379 polyadenylate-binding protein 2-like NW_010971389.1 - View
Trifolium pratense TPR.G12534 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI75G0570 NC_052253.1 - View
Tripterygium wilfordii TWI79G0953 NC_052238.1 + View
Tripterygium wilfordii TWI36G1136 NC_052237.1 - View
Tripterygium wilfordii TWI31G0758 NC_052233.1 + View
Tripterygium wilfordii TWI73G0672 NC_052232.1 + View
Tripterygium wilfordii TWI09G0355 NC_052245.1 - View
Tripterygium wilfordii TWI56G0152 NC_052242.1 + View
Vaccinium macrocarpon vmacro02026 Similar to PAB8: Polyadenylate-binding protein 8 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1078 CM024072.1 + View
Vitis vinifera GSVIVG01009455001 chr18 + View
Vitis vinifera GSVIVG01031709001 chr3 + View
Vitis vinifera GSVIVG01022079001 chr7 + View