Gene: AT2G15500
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G15500
- Transcript Identifier AT2G15500.1
- Gene Type Coding gene
- Location Chr2 : 6763707-6764751 : positive
Gene Family Information
- ID HOM05D000428
- #Genes/#Species 1201/100
- Phylogenetic origin
- ID ORTHO05D015400
- #Genes/#Species 12/8
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G15500.1
- uniprot Q9ZQG2
Descriptions
- Description RNA-binding protein
- Computational description RNA-binding protein; BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 110 Blast hits to 110 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 13; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IBA | Gene Ontology | RNA binding | 1 |
| GO:0003730 | IBA | Gene Ontology | mRNA 3'-UTR binding | 1 |
| GO:0008143 | IBA | Gene Ontology | poly(A) binding | 1 |
| GO:0008266 | IBA | Gene Ontology | poly(U) RNA binding | 1 |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D000428 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA | Gene Ontology | cytosol | 1 |
| GO:1990904 | IBA | Gene Ontology | ribonucleoprotein complex | 1 |
| GO:0005634 | IBA | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |