Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Acer truncatum | Atru.chr3.3794 | chr3 | + | View | |
| Actinidia chinensis | Actinidia07080 | Lachesis_group13 | - | View | |
| Actinidia chinensis | Actinidia37262 | Lachesis_group24 | - | View | |
| Actinidia chinensis | Actinidia03771 | Lachesis_group9 | + | View | |
| Arabidopsis lyrata | AL1G17910 | scaffold_1 | + | View | |
| Arabidopsis lyrata | AL8G36230 | scaffold_8 | + | View | |
| Avicennia marina | MSTRG.18609 | ScioBoG_22153_HRSCAF_22259 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.B07III | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.K398AB | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
| Arabidopsis thaliana | AT5G59710 | VIRE2 interacting protein 2 Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. VIRE2 interacting protein 2 (VIP2)%3B CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282)%3B BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2)%3B Has 3791 Blast hits to 3038 proteins in 463 species: Archae - 1%3B Bacteria - 1471%3B Metazoa - 837%3B Fungi - 516%3B Plants - 178%3B Viruses - 9%3B Other Eukaryotes - 779 (source: NCBI BLink). | Chr5 | + | View |
| Arabidopsis thaliana | AT1G07705 | NOT2 / NOT3 / NOT5 family NOT2 / NOT3 / NOT5 family%3B FUNCTIONS IN: transcription regulator activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282)%3B BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1)%3B Has 2858 Blast hits to 2245 proteins in 417 species: Archae - 0%3B Bacteria - 989%3B Metazoa - 670%3B Fungi - 343%3B Plants - 147%3B Viruses - 8%3B Other Eukaryotes - 701 (source: NCBI BLink). NOT2 / NOT3 / NOT5 family%3B FUNCTIONS IN: transcription regulator activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282)%3B BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1)%3B Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0%3B Bacteria - 983%3B Metazoa - 821%3B Fungi - 441%3B Plants - 185%3B Viruses - 8%3B Other Eukaryotes - 821 (source: NCBI BLink). | Chr1 | + | View |
| Brassica napus | A08p35440 | A08 | + | View | |
| Brassica napus | A06p04940 | A06 | - | View | |
| Brassica napus | C05p05850 | C05 | - | View | |
| Brassica napus | C08p03390 | C08 | - | View | |
| Brassica oleracea | BolC5t29351H | C5 | - | View | |
| Brassica rapa | BraA06t23699Z | A06 | - | View | |
| Brassica rapa | BraA08t35450Z | A08 | + | View | |
| Brassica rapa | BraA10t43776Z | A10 | + | View | |
| Capsicum annuum | CAN.G394.10 | PGAv.1.6.scaffold394 | + | View | |
| Cicer arietinum L. | Ca_01358_v3 | Ca_LG1_v3 | - | View | |
| Cicer arietinum L. | Ca_19213_v3 | Ca_LG6_v3 | - | View | |
| Corylus avellana | Haze_24004 | Similar to VIP2: Probable NOT transcription complex subunit VIP2 (Fragment) (Nicotiana benthamiana OX%3D4100) | 6 | + | View |
| Coffea canephora | Cc01_g12100 | Probable NOT transcription complex subunit VIP2 (Fragment) | chr1 | + | View |
| Citrus clementina | Ciclev10027964m.g | scaffold_8 | + | View | |
| Carpinus fangiana | Cfa011426 | Cfa04 | + | View | |
| Cardamine hirsuta | CARHR273280 | CCR4-NOT transcription complex subunit, putative | Chr8 | + | View |
| Cardamine hirsuta | CARHR007480 | CCR4-NOT transcription complex subunit 2 | Chr1 | + | View |
| Carya illinoinensis | CiPaw.14G074200 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Chr14 | - | View |
| Carya illinoinensis | CiPaw.13G101900 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Chr13 | - | View |
| Citrullus lanatus | ClCG02G020610 | CCR4-NOT transcription complex subunit, putative | CG_Chr02 | + | View |
| Cucumis melo | MELO3C013666.2 | CCR4-NOT transcription complex subunit 2 | chr11 | + | View |
| Capsella rubella | Carub.0008s2035 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | scaffold_8 | + | View |
| Cucumis sativus L. | CsaV3_6G022060 | CCR4-NOT transcription complex subunit 2 | chr6 | + | View |
| Daucus carota | DCAR_005297 | hypothetical protein | DCARv2_Chr2 | + | View |
| Davidia involucrata | Dinv26286 | GWHABJS00000007 | + | View | |
| Davidia involucrata | Dinv32863 | GWHABJS00000010 | - | View | |
| Durio zibethinus | Duzib150G0177 | NW_019167882.1 | + | View | |
| Durio zibethinus | Duzib170G0309 | NW_019167871.1 | - | View | |
| Durio zibethinus | Duzib168G1772 | NW_019168159.1 | - | View | |
| Erigeron canadensis | ECA247G4039 | Conyza_canadensis_scaffold:7 | - | View | |
| Erigeron canadensis | ECA236G0810 | Conyza_canadensis_scaffold:3 | - | View | |
| Eucalyptus grandis | Eucgr.J02100 | Chr10 | - | View | |
| Erythranthe guttata | Migut.D02149 | scaffold_4 | - | View | |
| Eutrema salsugineum | Thhalv10012986m.g | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | scaffold_2 | - | View |
| Eutrema salsugineum | Thhalv10007092m.g | scaffold_5 | + | View | |
| Fragaria x ananassa | FAN11G3854 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Fvb3-4 | + | View |
| Fragaria x ananassa | FAN16G3650 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Fvb3-3 | + | View |
| Fragaria x ananassa | FAN21G0358 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Fvb3-2 | + | View |
| Fragaria x ananassa | FAN25G3681 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Fvb3-1 | - | View |
| Fragaria vesca | FvH4_3g34620 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Fvb3 | + | View |
| Gossypium hirsutum | Gohir.D08G010100 | PTHR23326:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 | D08 | + | View |
| Gossypium hirsutum | Gohir.A05G098900 | PTHR23326:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 | A05 | - | View |
| Gossypium hirsutum | Gohir.D05G098901 | PTHR23326:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 | D05 | - | View |
| Glycine max | Glyma.13G331400 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Gm13 | + | View |
| Glycine max | Glyma.11G145854 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Gm11 | - | View |
| Glycine max | Glyma.12G074700 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Gm12 | + | View |
| Glycine max | Glyma.15G042700 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Gm15 | - | View |
| Gossypium raimondii | Gorai.009G102700 | Chr09 | - | View | |
| Helianthus annuus | HanXRQChr05g0134091 | Putative NOT2/NOT3/NOT5 | HanXRQChr05 | - | View |
| Hydrangea macrophylla | Hma1.2p1_0035F.1_g021830 | Hma1.2p1_0035F.1 | + | View | |
| Lupinus albus | Lalb_Chr14g0374941 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Lalb_Chr14 | + | View |
| Lupinus albus | Lalb_Chr24g0394301 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Lalb_Chr24 | - | View |
| Lotus japonicus | Lj3g0000216 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | chr3 | - | View |
| Lotus japonicus | Lj3g0019780 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | chr3 | - | View |
| Lonicera japonica | Lj2C1048T3 | GWHAAZE00000002 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_9_21580 | Lsat_1_v8_lg_9 | + | View | |
| Malus domestica | MD11G1117100 | NOT2 / NOT3 / NOT5 family | Chr11 | - | View |
| Malus domestica | MD03G1103300 | NOT2 / NOT3 / NOT5 family | Chr03 | - | View |
| Manihot esculenta | Manes.04G029100 | Chromosome04 | + | View | |
| Manihot esculenta | Manes.11G136600 | Chromosome11 | - | View | |
| Medicago truncatula | Medtr4g061843 | CCR4-NOT transcription complex subunit 2 | chr4 | + | View |
| Medicago truncatula | Medtr2g096180 | CCR4-NOT transcription complex subunit 2 | chr2 | + | View |
| Nelumbo nucifera | Nn2g10543 | chr2 | - | View | |
| Nelumbo nucifera | Nn2g12836 | chr2 | + | View | |
| Nicotiana tabacum | Nitab4.5_0002684g0140 | NOT2/NOT3/NOT5 | Nitab4.5_0002684 | + | View |
| Petunia axillaris | Peaxi162Scf00986g00114 | NOT2 / NOT3 / NOT5 family isoform 3 | Peaxi162Scf00986 | + | View |
| Petunia axillaris | Peaxi162Scf00411g00719 | CCR4-NOT transcription complex subunit 2 | Peaxi162Scf00411 | - | View |
| Punica granatum | PGR119G1579 | NC_045132.1 | + | View | |
| Punica granatum | PGR102G1233 | NC_045129.1 | + | View | |
| Prunus persica | Prupe.6G087300 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | Pp06 | - | View |
| Pisum sativum | Psat7g220840 | NOT2 / NOT3 / NOT5 family | chr7LG7 | - | View |
| Pisum sativum | Psat5g282320 | NOT2 / NOT3 / NOT5 family | chr5LG3 | + | View |
| Papaver somniferum | PSO339G0540 | NC_039366.1 | - | View | |
| Phaseolus vulgaris | Phvul.011G069400 | Chr11 | - | View | |
| Quercus lobata | QL01p034369 | 1 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr5g0062331 | RcHm_v2.0_Chr5 | + | View | |
| Rhododendron simsii | Rhsim13G0088600 | chr13 | - | View | |
| Salvia bowleyana | SalBow3G3367 | GWHASIU00000006 | - | View | |
| Sechium edule | Sed0007799 | LG05 | + | View | |
| Sechium edule | Sed0008508 | LG01 | + | View | |
| Solanum lycopersicum | Solyc06g075590.4 | NOT2/NOT3/NOT5-like protein (AHRD V3.3 *** A0A2U1KP40_ARTAN) | SL4.0ch06 | + | View |
| Solanum lycopersicum | Solyc11g072940.2 | NOT2/NOT3/NOT5-like protein (AHRD V3.3 *** A0A2U1KP40_ARTAN) | SL4.0ch11 | + | View |
| Schrenkiella parvula | Sp6g21380 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | ch6-6 | + | View |
| Schrenkiella parvula | Sp1g06500 | K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) | ch1-1 | - | View |
| Solanum pennellii | Sopen11g030600 | NOT2 / NOT3 / NOT5 family | FUNCTIONS IN: transcription regulator activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 | BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 | Spenn-ch11 | + | View |
| Solanum pennellii | Sopen06g031990 | NOT2 / NOT3 / NOT5 family | FUNCTIONS IN: transcription regulator activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 | BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 | Spenn-ch06 | + | View |
| Solanum tuberosum | PGSC0003DMG400030306 | CCR4-NOT transcription complex subunit | ST4.03ch06 | + | View |
| Solanum tuberosum | PGSC0003DMG402015527 | VIP2 | ST4.03ch11 | + | View |
| Trochodendron aralioides | TAR369G0172 | group18 | - | View | |
| Theobroma cacao | Thecc.09G330500 | NOT2 / NOT3 / NOT5 family | Chromosome_9 | - | View |
| Tarenaya hassleriana | THA.LOC104800634 | probable NOT transcription complex subunit VIP2 | NW_010969548.1 | + | View |
| Trifolium pratense | TPR.G11503 | Tp57577_TGAC_v2_LG7 | + | View | |
| Trifolium pratense | TPR.G2973 | Tp57577_TGAC_v2_LG4 | + | View | |
| Vigna mungo | VMungo1127G1223 | CM024076.1 | - | View | |
| Vitis vinifera | GSVIVG01025059001 | chr6 | + | View |