Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG8G3130 | LG-8 | - | View | |
Aethionema arabicum | Aa31LG10G2550 | LG-10 | - | View | |
Acer truncatum | Atru.chr1.3251 | chr1 | + | View | |
Actinidia chinensis | Actinidia01799 | Lachesis_group1 | + | View | |
Actinidia chinensis | Actinidia08973 | Lachesis_group2 | + | View | |
Actinidia chinensis | Actinidia24762 | Lachesis_group9 | + | View | |
Actinidia chinensis | Actinidia32763 | Lachesis_group27 | - | View | |
Arabidopsis lyrata | AL3G28630 | scaffold_3 | - | View | |
Arabidopsis lyrata | AL1G60610 | scaffold_1 | + | View | |
Arabidopsis lyrata | AL2G41550 | scaffold_2 | - | View | |
Amaranthus hybridus | Ah.01g021250 | AmaHy_arrow1_Scaffold_1 | - | View | |
Aquilegia oxysepala | Aqoxy7G01801 | CHR07 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.L7HHT1 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | arahy.Tifrunner.gnm1.Arahy.18 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.T3EJFH | PTHR19876//PTHR19876:SF6//PTHR33510//PTHR33510:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 // FAMILY NOT NAMED // PROTEIN TIC 20-I, CHLOROPLASTIC | arahy.Tifrunner.gnm1.Arahy.09 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.3FE9AW | K17302 - coatomer, subunit beta' (COPB2, SEC27) | arahy.Tifrunner.gnm1.Arahy.07 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.Y6NHJS | PTHR19876//PTHR19876:SF6//PTHR33510//PTHR33510:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 // FAMILY NOT NAMED // PROTEIN TIC 20-I, CHLOROPLASTIC | arahy.Tifrunner.gnm1.Arahy.19 | - | View |
Arabidopsis thaliana | AT1G79990 | coatomer subunit beta-2 structural molecules%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: membrane coat%2C endomembrane system%2C COPI vesicle coat%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C Coatomer%2C WD associated region (InterPro:IPR006692)%2C WD40 repeat (InterPro:IPR001680)%2C Integral membrane protein SYS1-related (InterPro:IPR019185)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Coatomer%2C beta' subunit (TAIR:AT1G52360.1)%3B Has 74874 Blast hits to 32688 proteins in 816 species: Archae - 58%3B Bacteria - 8441%3B Metazoa - 30042%3B Fungi - 16255%3B Plants - 9898%3B Viruses - 0%3B Other Eukaryotes - 10180 (source: NCBI BLink). | Chr1 | + | View |
Arabidopsis thaliana | AT3G15980 | Coatomer, beta' subunit Coatomer%2C beta' subunit%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: membrane coat%2C COPI vesicle coat%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C Coatomer%2C WD associated region (InterPro:IPR006692)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C Coatomer%2C beta' subunit (InterPro:IPR016453)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Coatomer%2C beta' subunit (TAIR:AT1G52360.1)%3B Has 77112 Blast hits to 32696 proteins in 822 species: Archae - 74%3B Bacteria - 8637%3B Metazoa - 30981%3B Fungi - 17314%3B Plants - 9768%3B Viruses - 0%3B Other Eukaryotes - 10338 (source: NCBI BLink). | Chr3 | - | View |
Brassica carinata | BcaB04g20889 | ChrB04 | + | View | |
Brassica carinata | BcaB02g07300 | ChrB02 | - | View | |
Brassica carinata | BcaC09g48577 | ChrC09 | - | View | |
Brassica carinata | BcaC08g45283 | ChrC08 | + | View | |
Brassica napus | A03p39610 | A03 | - | View | |
Beta vulgaris | EL10Ac9g21993 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Chr9_EL10_PGA_scaffold8 | - | View |
Capsicum annuum | CAN.G438.61 | PGAv.1.6.scaffold438 | - | View | |
Cannabis sativa | CANSAT56G0519 | NC_044371.1 | - | View | |
Cannabis sativa | CANSAT56G4334 | NC_044371.1 | + | View | |
Cicer arietinum L. | Ca_20396_v3 | Ca_LG6_v3 | + | View | |
Cicer arietinum L. | Ca_01109_v3 | Ca_LG1_v3 | - | View | |
Corylus avellana | Haze_16439 | Similar to At1g79990: Coatomer subunit beta'-1 (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
Coffea canephora | Cc04_g03510 | Coatomer subunit beta'-2 | chr4 | + | View |
Citrus clementina | Ciclev10026022m.g | scaffold_7 | + | View | |
Carpinus fangiana | Cfa002058 | Cfa01 | - | View | |
Cardamine hirsuta | CARHR042500 | Coatomer subunit beta'-2 | Chr1 | + | View |
Cardamine hirsuta | CARHR091110 | Coatomer subunit beta'-3 | Chr3 | - | View |
Cardamine hirsuta | CARHR074490 | Coatomer subunit beta'-1 | Chr2 | - | View |
Carya illinoinensis | CiPaw.02G151700 | KOG0265//KOG0286 - U5 snRNP-specific protein-like factor and related proteins // G-protein beta subunit | Chr02 | + | View |
Carya illinoinensis | CiPaw.01G240100 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Chr01 | + | View |
Citrullus lanatus | ClCG07G012990 | Coatomer beta subunit, putative | CG_Chr07 | - | View |
Citrullus lanatus | ClCG09G002200 | Coatomer beta subunit, putative | CG_Chr09 | + | View |
Cucumis melo | MELO3C012954.2 | Coatomer subunit beta' | chr04 | - | View |
Cucumis melo | MELO3C024225.2 | Coatomer subunit beta' | chr01 | - | View |
Chenopodium quinoa | AUR62011624 | At1g52360: Coatomer subunit beta'-2 | C_Quinoa_Scaffold_3333 | - | View |
Chenopodium quinoa | AUR62016439 | At1g52360: Coatomer subunit beta'-2 | C_Quinoa_Scaffold_3514 | - | View |
Capsella rubella | Carub.0002s2752 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | scaffold_2 | - | View |
Capsella rubella | Carub.0003s1571 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | scaffold_3 | - | View |
Cucumis sativus L. | CsaV3_3G026240 | Coatomer subunit beta' | chr3 | + | View |
Cucumis sativus L. | CsaV3_7G033100 | Coatomer subunit beta' | chr7 | - | View |
Daucus carota | DCAR_026311 | hypothetical protein | DCARv2_Chr7 | - | View |
Daucus carota | DCAR_007555 | hypothetical protein | DCARv2_Chr2 | - | View |
Daucus carota | DCAR_016223 | hypothetical protein | DCARv2_Chr5 | + | View |
Davidia involucrata | Dinv38054 | GWHABJS00000006 | + | View | |
Davidia involucrata | Dinv30517 | GWHABJS00000019 | - | View | |
Durio zibethinus | Duzib160G0755 | NW_019168015.1 | + | View | |
Durio zibethinus | Duzib192G0572 | NW_019168037.1 | - | View | |
Durio zibethinus | Duzib235G0424 | NW_019167982.1 | - | View | |
Erigeron canadensis | ECA247G1000 | Conyza_canadensis_scaffold:7 | - | View | |
Erigeron canadensis | ECA232G3466 | Conyza_canadensis_scaffold:2 | - | View | |
Erigeron canadensis | ECA234G4381 | Conyza_canadensis_scaffold:4 | + | View | |
Eucalyptus grandis | Eucgr.J02997 | Chr10 | + | View | |
Erythranthe guttata | Migut.I00859 | scaffold_9 | - | View | |
Eutrema salsugineum | Thhalv10020009m.g | scaffold_13 | + | View | |
Eutrema salsugineum | Thhalv10011217m.g | scaffold_7 | - | View | |
Fragaria x ananassa | FAN23G1780 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb1-3 | + | View |
Fragaria x ananassa | FAN26G0548 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb1-2 | - | View |
Fragaria x ananassa | FAN26G3040 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb1-2 | - | View |
Fragaria x ananassa | FAN09G0485 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb6-2 | + | View |
Fragaria x ananassa | FAN14G5153 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb6-1 | + | View |
Fragaria x ananassa | FAN05G5420 | KOG0265//KOG0286 - U5 snRNP-specific protein-like factor and related proteins // G-protein beta subunit | Fvb6-3 | + | View |
Fragaria x ananassa | FAN02G0089 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb6-4 | - | View |
Fragaria vesca | FvH4_6g31010 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Fvb6 | - | View |
Gossypium hirsutum | Gohir.A09G083400 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | A09 | + | View |
Gossypium hirsutum | Gohir.D05G128650 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | D05 | - | View |
Gossypium hirsutum | Gohir.D09G083400 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | D09 | + | View |
Gossypium hirsutum | Gohir.A05G127983 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | A05 | - | View |
Gossypium hirsutum | Gohir.A10G079600 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | A10 | - | View |
Gossypium hirsutum | Gohir.D03G074500 | PTHR19876//PTHR19876:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 | D03 | - | View |
Gossypium hirsutum | Gohir.A02G122100 | PTHR19876//PTHR19876:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 | A02 | + | View |
Gossypium hirsutum | Gohir.D10G071800 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | D10 | + | View |
Glycine max | Glyma.13G360100 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Gm13 | - | View |
Glycine max | Glyma.08G207300 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Gm08 | + | View |
Glycine max | Glyma.15G013800 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Gm15 | - | View |
Gossypium raimondii | Gorai.009G132800 | Chr09 | - | View | |
Gossypium raimondii | Gorai.011G077200 | Chr11 | + | View | |
Gossypium raimondii | Gorai.006G099000 | Chr06 | + | View | |
Gossypium raimondii | Gorai.002G058900 | Chr02 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0682F.1_g202730 | Hma1.2p1_0682F.1 | - | View | |
Lupinus albus | Lalb_Chr24g0395801 | PTHR19876//PTHR19876:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 | Lalb_Chr24 | - | View |
Lupinus albus | Lalb_Chr04g0262611 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Lalb_Chr04 | + | View |
Lupinus albus | Lalb_Chr01g0012581 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Lalb_Chr01 | + | View |
Lupinus albus | Lalb_Chr22g0351211 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Lalb_Chr22 | - | View |
Lupinus albus | Lalb_Chr14g0373461 | PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 | Lalb_Chr14 | + | View |
Lotus japonicus | Lj3g0002969 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | chr3 | + | View |
Lotus japonicus | Lj3g0017633 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | chr3 | + | View |
Lonicera japonica | Lj5C61G9 | GWHAAZE00000005 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_4_103400 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Lsat_1_v8_lg_4 | + | View |
Lactuca sativa | Lsat_1_v5_gn_5_130021 | Lsat_1_v8_lg_5 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_1_34861 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Lsat_1_v8_lg_1 | - | View |
Malus domestica | MD09G1214300 | Coatomer | Chr09 | + | View |
Malus domestica | MD17G1196600 | Coatomer | Chr17 | + | View |
Manihot esculenta | Manes.04G122600 | Chromosome04 | - | View | |
Manihot esculenta | Manes.11G048100 | Chromosome11 | + | View | |
Medicago truncatula | Medtr4g011950 | coatomer subunit beta-like protein | chr4 | - | View |
Medicago truncatula | Medtr2g102267 | coatomer subunit beta-like protein | chr2 | + | View |
Nelumbo nucifera | Nn8g39236 | chr8 | + | View | |
Nelumbo nucifera | Nn2g11796 | chr2 | + | View | |
Nicotiana tabacum | Nitab4.5_0000351g0180 | Coatomer beta' subunit (COPB2), WD40-repeat-containing domain, WD40 repeat, WD40/YVTN repeat-like-containing domain, G-protein beta WD-40 repeat, Coatomer, WD associated region | Nitab4.5_0000351 | + | View |
Nicotiana tabacum | Nitab4.5_0000671g0030 | WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain, Coatomer, WD associated region, Coatomer beta' subunit (COPB2), WD40 repeat, G-protein beta WD-40 repeat | Nitab4.5_0000671 | - | View |
Olea europaea | Oeu033482.1 | chr1 | - | View | |
Petunia axillaris | Peaxi162Scf00015g00310 | Coatomer, beta' subunit | Peaxi162Scf00015 | - | View |
Petunia axillaris | Peaxi162Scf00034g01011 | Coatomer, beta' subunit | Peaxi162Scf00034 | + | View |
Punica granatum | PGR102G1395 | NC_045129.1 | - | View | |
Prunus persica | Prupe.3G072200 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Pp03 | + | View |
Prunus persica | Prupe.7G228200 | PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 | Pp07 | - | View |
Pisum sativum | Psat7g252880 | Coatomer WD associated region | chr7LG7 | + | View |
Populus trichocarpa | Potri.003G056300 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Chr03 | + | View |
Populus trichocarpa | Potri.001G179200 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Chr01 | - | View |
Phaseolus vulgaris | Phvul.005G171900 | KOG0265//KOG0279 - U5 snRNP-specific protein-like factor and related proteins // G protein beta subunit-like protein | Chr05 | + | View |
Phaseolus vulgaris | Phvul.010G151200 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | Chr10 | + | View |
Quercus lobata | QL05p024734 | 5 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0137661 | RcHm_v2.0_Chr2 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0090881 | RcHm_v2.0_Chr2 | + | View | |
Rhododendron simsii | Rhsim12G0197300 | chr12 | - | View | |
Rhododendron simsii | Rhsim08G0220500 | chr08 | - | View | |
Striga asiatica | SGA_v2.0_scaffold5G02597 | scaffold5 | + | View | |
Striga asiatica | SGA_v2.0_scaffold4G01992 | scaffold4 | - | View | |
Salvia bowleyana | SalBow2G2475 | GWHASIU00000007 | + | View | |
Salix brachista | Sabra01G0147500 | GWHAAZH00000001 | + | View | |
Salix brachista | Sabra03G0031700 | GWHAAZH00000003 | + | View | |
Simmondsia chinensis | Sc12g0009250 | GWHAASQ00000012 | + | View | |
Sechium edule | Sed0009223 | LG07 | + | View | |
Sechium edule | Sed0002337 | LG09 | - | View | |
Sechium edule | Sed0002090 | LG05 | - | View | |
Solanum lycopersicum | Solyc03g120260.4 | Coatomer subunit beta' (AHRD V3.3 *-* A0A1Q3BXD5_CEPFO) | SL4.0ch03 | + | View |
Solanum lycopersicum | Solyc12g043000.3 | Coatomer subunit beta' (AHRD V3.3 *** A0A2I4GPU3_9ROSI) | SL4.0ch12 | - | View |
Schrenkiella parvula | Sp1g38970 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | ch1-2 | + | View |
Schrenkiella parvula | Sp3g14330 | K17302 - coatomer, subunit beta' (COPB2, SEC27) | ch3-1 | - | View |
Solanum pennellii | Sopen12g022230 | structural molecules | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat, COPI vesicle coat | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Coatomer, WD associated region , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , Coatomer, beta subunit , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit | Spenn-ch12 | - | View |
Solanum pennellii | Sopen03g039140 | structural molecules | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat, COPI vesicle coat | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Coatomer, WD associated region , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , Coatomer, beta subunit , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit | Spenn-ch03 | + | View |
Solanum tuberosum | PGSC0003DMG400002566 | Coatomer subunit beta'-2 | ST4.03ch03 | - | View |
Solanum tuberosum | PGSC0003DMG400028615 | Coatomer beta subunit | ST4.03ch12 | - | View |
Selenicereus undatus | Hund06605 | Scaffold_33676 | - | View | |
Selenicereus undatus | Hund00606 | Scaffold_33678 | - | View | |
Trochodendron aralioides | TAR636G0456 | group1 | - | View | |
Trochodendron aralioides | TAR383G0836 | group10 | - | View | |
Trochodendron aralioides | TAR624G1338 | group9 | + | View | |
Theobroma cacao | Thecc.06G085200 | Coatomer | Chromosome_6 | - | View |
Trifolium pratense | TPR.G24154 | Tp57577_TGAC_v2_LG4 | + | View | |
Trifolium pratense | TPR.G37296 | Tp57577_TGAC_v2_LG7 | - | View | |
Tripterygium wilfordii | TWI75G0804 | NC_052253.1 | + | View | |
Tripterygium wilfordii | TWI18G0225 | NC_052241.1 | - | View | |
Vaccinium macrocarpon | vmacro16946 | Similar to At1g52360: Coatomer subunit beta'-2 (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro18920 | Similar to At1g52360: Coatomer subunit beta'-2 (Arabidopsis thaliana OX%3D3702) | chr5_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1080G0964 | CM024079.1 | - | View | |
Vigna mungo | VMungo0331G0451 | CM024078.1 | - | View |