Gene: vmacro16946
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro16946
- Transcript Identifier vmacro16946-RA
- Gene Type Coding gene
- Location chr4_Vaccinium_macrocarpon_Stevens_v1 : 1553610-1565597 : negative
Gene Family Information
- ID HOM05D001315
- #Genes/#Species 477/100
- Phylogenetic origin
- ID ORTHO05D001618
- #Genes/#Species 381/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro16946_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to At1g52360: Coatomer subunit beta'-2 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G79990 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016453 | Coatomer beta' subunit (COPB2) |
| IPR001680 | WD40 repeat |
| IPR006692 | Coatomer, WD associated region |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR011044 | Quinoprotein amine dehydrogenase, beta chain-like |
| IPR036322 | WD40-repeat-containing domain superfamily |
| Mapman id | Description |
|---|---|
| 22.2.1.1.2 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit beta2 |