Gene: Sopen03g039140

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g039140
  • Transcript Identifier Sopen03g039140.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73299758-73301916 : positive

Gene Family Information

  • ID HOM05D001315
  • #Genes/#Species 477/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g039140.1

Descriptions

  • Description structural molecules | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat, COPI vesicle coat | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Coatomer, WD associated region , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , Coatomer, beta subunit , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
ISO
PLAZA Homology (enrichment)vesicle-mediated transport HOM05D001315
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D001315

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005198
ISO
PLAZA Homology (enrichment)structural molecule activity HOM05D001315

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030117
ISO
PLAZA Homology (enrichment)membrane coat HOM05D001315

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated